Information for 11-CTGGGGCATCCAG (Motif 16)

A G T C G A C T T A C G T A C G C T A G A C T G A G T C T C G A A C G T T A G C A T G C C G T A A C T G
Reverse Opposite:
G T A C G A C T A T C G A T C G T G C A A C G T T A C G A G T C A G T C A G T C A T G C C T G A A C T G
p-value:1e-8
log p-value:-1.876e+01
Information Content per bp:1.774
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.75%
Number of Background Sequences with motif137.1
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets50.1 +/- 24.6bp
Average Position of motif in Background49.6 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:1
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CTGGGGCATCCAG
TGCCTGAGGCN-----
 A C G T A C G T A C G T A G T C G A C T T A C G T A C G C T A G A C T G A G T C T C G A A C G T T A G C A T G C C G T A A C T G
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:2
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CTGGGGCATCCAG
NGCCTGAGGCN-----
 A C G T A C G T A C G T A G T C G A C T T A C G T A C G C T A G A C T G A G T C T C G A A C G T T A G C A T G C C G T A A C T G
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T A C G T A C G T A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:3
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CTGGGGCATCCAG
NNNNTTGGGCACNNCN
 A C G T A C G T A C G T A G T C G A C T T A C G T A C G C T A G A C T G A G T C T C G A A C G T T A G C A T G C C G T A A C T G
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

PB0110.1_Bcl6b_2/Jaspar

Match Rank:4
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CTGGGGCATCCAG
NNTNAGGGGCGGNNNN
 A C G T A C G T A C G T A G T C G A C T T A C G T A C G C T A G A C T G A G T C T C G A A C G T T A G C A T G C C G T A A C T G
A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:5
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CTGGGGCATCCAG
ATTGCCTGAGGCAAT---
 A C G T A C G T A C G T A C G T A C G T A G T C G A C T T A C G T A C G C T A G A C T G A G T C T C G A A C G T T A G C A T G C C G T A A C T G
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T A C G T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CTGGGGCATCCAG
ATGCCCTGAGGC------
 A C G T A C G T A C G T A C G T A C G T A G T C G A C T T A C G T A C G C T A G A C T G A G T C T C G A A C G T T A G C A T G C C G T A A C T G
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CTGGGGCATCCAG
NGCCTNAGGCN-----
 A C G T A C G T A C G T A G T C G A C T T A C G T A C G C T A G A C T G A G T C T C G A A C G T T A G C A T G C C G T A A C T G
G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CTGGGGCATCCAG--
TTGGGGGCGCCCCTAG
 A C G T A G T C G A C T T A C G T A C G C T A G A C T G A G T C T C G A A C G T T A G C A T G C C G T A A C T G A C G T A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:9
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----CTGGGGCATCCAG
WTGSCCTSAGGS------
 A C G T A C G T A C G T A C G T A C G T A G T C G A C T T A C G T A C G C T A G A C T G A G T C T C G A A C G T T A G C A T G C C G T A A C T G
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T A C G T A C G T

PB0202.1_Zfp410_2/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CTGGGGCATCCAG-
NNTNNGGGGCGGNGNGN
 A C G T A C G T A C G T A G T C G A C T T A C G T A C G C T A G A C T G A G T C T C G A A C G T T A G C A T G C C G T A A C T G A C G T
C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A