Information for 10-AGGTCGGGTCTGG (Motif 15)

C G T A C T A G A C T G A C G T A G T C C T A G A C T G A C T G A C G T A G T C A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A A C T G G T C A A G T C A G T C A G T C A C T G G T C A A G T C A G T C A C G T
p-value:1e-8
log p-value:-1.877e+01
Information Content per bp:1.914
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.0 +/- 29.9bp
Average Position of motif in Background57.2 +/- 17.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.64
Offset:6
Orientation:forward strand
Alignment:AGGTCGGGTCTGG---
------GGTCTGGCAT
 C G T A C T A G A C T G A C G T A G T C C T A G A C T G A C T G A C G T A G T C A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AGGTCGGGTCTGG-----
-NNTNNTGTCTGGNNTNG
 C G T A C T A G A C T G A C G T A G T C C T A G A C T G A C T G A C G T A G T C A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

PB0151.1_Myf6_2/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AGGTCGGGTCTGG----
--GGNGCGNCTGTTNNN
 C G T A C T A G A C T G A C G T A G T C C T A G A C T G A C T G A C G T A G T C A C G T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.60
Offset:3
Orientation:forward strand
Alignment:AGGTCGGGTCTGG
---VBSYGTCTGG
 C G T A C T A G A C T G A C G T A G T C C T A G A C T G A C T G A C G T A G T C A C G T A C T G A C T G
A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.60
Offset:5
Orientation:forward strand
Alignment:AGGTCGGGTCTGG
-----CTGTCTGG
 C G T A C T A G A C T G A C G T A G T C C T A G A C T G A C T G A C G T A G T C A C G T A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

POL003.1_GC-box/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AGGTCGGGTCTGG
AGGGGGCGGGGCTG-
 A C G T A C G T C G T A C T A G A C T G A C G T A G T C C T A G A C T G A C T G A C G T A G T C A C G T A C T G A C T G
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGGTCGGGTCTGG--
GGGGCTYGKCTGGGA
 C G T A C T A G A C T G A C G T A G T C C T A G A C T G A C T G A C G T A G T C A C G T A C T G A C T G A C G T A C G T
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:AGGTCGGGTCTGG-
----TGGGTGTGGC
 C G T A C T A G A C T G A C G T A G T C C T A G A C T G A C T G A C G T A G T C A C G T A C T G A C T G A C G T
A C G T A C G T A C G T A C G T C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:9
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AGGTCGGGTCTGG--
---NTGGGTGTGGCC
 C G T A C T A G A C T G A C G T A G T C C T A G A C T G A C T G A C G T A G T C A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C

Sp1(Zf)/Promoter/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AGGTCGGGTCTGG
GGGGGCGGGGCC--
 A C G T C G T A C T A G A C T G A C G T A G T C C T A G A C T G A C T G A C G T A G T C A C G T A C T G A C T G
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T