Information for 5-CCCGCGGSGCAAGGCG (Motif 10)

A G T C A G T C A G T C A T C G A G T C A T C G A C T G A T C G A T C G T G A C C G T A C G T A C T A G A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C A G T C C G A T A C G T A C T G A T G C A T G C A G T C T A G C A C T G T A G C A C T G A C T G C T A G
p-value:1e-10
log p-value:-2.428e+01
Information Content per bp:1.826
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets67.2 +/- 23.1bp
Average Position of motif in Background13.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:1
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CCCGCGGSGCAAGGCG
TGCCCNNAGGGCA-----
 A C G T A C G T A G T C A G T C A G T C A T C G A G T C A T C G A C T G A T C G A T C G T G A C C G T A C G T A C T A G A C T G A G T C A C T G
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T A C G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:2
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CCCGCGGSGCAAGGCG
TGCCCTGAGGGCA-----
 A C G T A C G T A G T C A G T C A G T C A T C G A G T C A T C G A C T G A T C G A T C G T G A C C G T A C G T A C T A G A C T G A G T C A C T G
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:3
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CCCGCGGSGCAAGGCG-
---GCCGCGCAGTGCGT
 A G T C A G T C A G T C A T C G A G T C A T C G A C T G A T C G A T C G T G A C C G T A C G T A C T A G A C T G A G T C A C T G A C G T
A C G T A C G T A C G T C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:4
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CCCGCGGSGCAAGGCG
ATTCCCTGAGGGGAA----
 A C G T A C G T A C G T A G T C A G T C A G T C A T C G A G T C A T C G A C T G A T C G A T C G T G A C C G T A C G T A C T A G A C T G A G T C A C T G
C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A A C G T A C G T A C G T A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CCCGCGGSGCAAGGCG
TGCCCTNAGGGCA-----
 A C G T A C G T A G T C A G T C A G T C A T C G A G T C A T C G A C T G A T C G A T C G T G A C C G T A C G T A C T A G A C T G A G T C A C T G
G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T A C G T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CCCGCGGSGCAAGGCG
NTCGCCTCAGGCAAT----
 A C G T A C G T A C G T A G T C A G T C A G T C A T C G A G T C A T C G A C T G A T C G A T C G T G A C C G T A C G T A C T A G A C T G A G T C A C T G
G C A T C G A T G A T C A T C G G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A G C C T G A C G T A C G A T A C G T A C G T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CCCGCGGSGCAAGGCG
GCCTCAGGGCAT----
 A G T C A G T C A G T C A T C G A G T C A T C G A C T G A T C G A T C G T G A C C G T A C G T A C T A G A C T G A G T C A C T G
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CCCGCGGSGCAAGGCG
SCCTSAGGSCAW----
 A G T C A G T C A G T C A T C G A G T C A T C G A C T G A T C G A T C G T G A C C G T A C G T A C T A G A C T G A G T C A C T G
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T A C G T A C G T A C G T A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CCCGCGGSGCAAGGCG
ACCCCCCCGGGGGGN----
 A C G T A C G T A C G T A G T C A G T C A G T C A T C G A G T C A T C G A C T G A T C G A T C G T G A C C G T A C G T A C T A G A C T G A G T C A C T G
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G A C G T A C G T A C G T A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:10
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CCCGCGGSGCAAGGCG
NCCCCCCCGGGGGGN----
 A C G T A C G T A C G T A G T C A G T C A G T C A T C G A G T C A T C G A C T G A T C G A T C G T G A C C G T A C G T A C T A G A C T G A G T C A C T G
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G A C G T A C G T A C G T A C G T