Information for 2-AGGCCGCCTG (Motif 7)

G T C A A T C G T C A G A G T C A G T C A T C G A G T C G T A C C G A T A T C G
Reverse Opposite:
A T G C C G T A A C T G C T A G A T G C T A C G C T A G A G T C A T G C A C G T
p-value:1e-10
log p-value:-2.441e+01
Information Content per bp:1.828
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif3.75%
Number of Background Sequences with motif466.2
Percentage of Background Sequences with motif0.96%
Average Position of motif in Targets51.0 +/- 24.9bp
Average Position of motif in Background49.6 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AGGCCGCCTG
AGCGCGCC--
G T C A A T C G T C A G A G T C A G T C A T C G A G T C G T A C C G A T A T C G
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AGGCCGCCTG
CTAGGCCT----
A C G T A C G T G T C A A T C G T C A G A G T C A G T C A T C G A G T C G T A C C G A T A T C G
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AGGCCGCCTG--
--NNCACCTGNN
G T C A A T C G T C A G A G T C A G T C A T C G A G T C G T A C C G A T A T C G A C G T A C G T
A C G T A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AGGCCGCCTG-
-VBSYGTCTGG
G T C A A T C G T C A G A G T C A G T C A T C G A G T C G T A C C G A T A T C G A C G T
A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AGGCCGCCTG
CNAGGCCT----
A C G T A C G T G T C A A T C G T C A G A G T C A G T C A T C G A G T C G T A C C G A T A T C G
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AGGCCGCCTG---
-SNGCACCTGCHS
G T C A A T C G T C A G A G T C A G T C A T C G A G T C G T A C C G A T A T C G A C G T A C G T A C G T
A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

ZIC4/MA0751.1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AGGCCGCCTG------
-GACCCCCCGCTGTGC
G T C A A T C G T C A G A G T C A G T C A T C G A G T C G T A C C G A T A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AGGCCGCCTG-
---CTGTCTGG
G T C A A T C G T C A G A G T C A G T C A T C G A G T C G T A C C G A T A T C G A C G T
A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----AGGCCGCCTG---
CATAAGACCACCATTAC
A C G T A C G T A C G T A C G T G T C A A T C G T C A G A G T C A G T C A T C G A G T C G T A C C G A T A T C G A C G T A C G T A C G T
A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AGGCCGCCTG-
-RYHYACCTGB
G T C A A T C G T C A G A G T C A G T C A T C G A G T C G T A C C G A T A T C G A C G T
A C G T T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T