Information for 2-CGAGTTCCCTGCG (Motif 3)

A G T C A C T G C T G A A C T G A C G T A G C T A T G C A G T C A G T C C G A T A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C C G T A A C T G A C T G A T C G C T G A C G T A A G T C A G C T A G T C A C T G
p-value:1e-13
log p-value:-3.032e+01
Information Content per bp:1.913
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.2 +/- 26.6bp
Average Position of motif in Background27.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CGAGTTCCCTGCG--
---GTCCCCAGGGGA
 A G T C A C T G C T G A A C T G A C G T A G C T A T G C A G T C A G T C C G A T A C T G A G T C A C T G A C G T A C G T
A C G T A C G T A C G T C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A

PB0204.1_Zfp740_2/Jaspar

Match Rank:2
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CGAGTTCCCTGCG-----
-AAATTCCCCCCGGAAGT
 A G T C A C T G C T G A A C T G A C G T A G C T A T G C A G T C A G T C C G A T A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C T G A C T G A C A G T G C A T G A T C G A T C A G T C A G T C A T G C A T G C T A C G A T C G C T G A C T G A T C A G A G C T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:CGAGTTCCCTGCG-
----TGCCCAGNHW
 A G T C A C T G C T G A A C T G A C G T A G C T A T G C A G T C A G T C C G A T A C T G A G T C A C T G A C G T
A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.51
Offset:3
Orientation:forward strand
Alignment:CGAGTTCCCTGCG
---ATTTCCTGTN
 A G T C A C T G C T G A A C T G A C G T A G C T A T G C A G T C A G T C C G A T A C T G A G T C A C T G
A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:CGAGTTCCCTGCG
---ATTTCCTGTN
 A G T C A C T G C T G A A C T G A C G T A G C T A T G C A G T C A G T C C G A T A C T G A G T C A C T G
A C G T A C G T A C G T C T G A A G C T A C G T A C G T A G T C A G T C A C G T A C T G G A C T A C G T

Vdr/MA0693.1/Jaspar

Match Rank:6
Score:0.50
Offset:1
Orientation:forward strand
Alignment:CGAGTTCCCTGCG----
-GAGTTCATTGAGTTCA
 A G T C A C T G C T G A A C T G A C G T A G C T A T G C A G T C A G T C C G A T A C T G A G T C A C T G A C G T A C G T A C G T A C G T
A C G T T C A G T C G A C A T G A C G T A C G T A G T C C T G A G A C T G A C T T C A G T C G A C T A G A C G T A C G T A G T C C T G A

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:7
Score:0.50
Offset:2
Orientation:forward strand
Alignment:CGAGTTCCCTGCG-
--NGTCCCNNGGGA
 A G T C A C T G C T G A A C T G A C G T A G C T A T G C A G T C A G T C C G A T A C T G A G T C A C T G A C G T
A C G T A C G T C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:8
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:CGAGTTCCCTGCG-----
---NTCCCCTCAGGGANT
 A G T C A C T G C T G A A C T G A C G T A G C T A T G C A G T C A G T C C G A T A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C G A T G A T C A T G C G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A C G C G T A G C T A G C A T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.49
Offset:3
Orientation:forward strand
Alignment:CGAGTTCCCTGCG--
---ATGCCCTGAGGC
 A G T C A C T G C T G A A C T G A C G T A G C T A T G C A G T C A G T C C G A T A C T G A G T C A C T G A C G T A C G T
A C G T A C G T A C G T G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C

RELA/MA0107.1/Jaspar

Match Rank:10
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-CGAGTTCCCTGCG
GGGAATTTCC----
 A C G T A G T C A C T G C T G A A C T G A C G T A G C T A T G C A G T C A G T C C G A T A C T G A G T C A C T G
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T