Information for 1-ACTCGAATAG (Motif 2)

C T G A A G T C A C G T A G T C A C T G C G T A C T G A G A C T C G T A A C T G
Reverse Opposite:
G T A C C G A T C T G A A G C T A C G T G T A C T C A G G T C A T C A G G A C T
p-value:1e-13
log p-value:-3.044e+01
Information Content per bp:1.707
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif1.93%
Number of Background Sequences with motif79.6
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets45.1 +/- 19.8bp
Average Position of motif in Background50.5 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:ACTCGAATAG--
--TGGAACAGMA
 C T G A A G T C A C G T A G T C A C T G C G T A C T G A G A C T C G T A A C T G A C G T A C G T
A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A

PH0111.1_Nkx2-2/Jaspar

Match Rank:2
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------ACTCGAATAG-
ATAACCACTTGAAAATT
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G T C A C G T A G T C A C T G C G T A C T G A G A C T C G T A A C T G A C G T
G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T

NKX2-8/MA0673.1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--ACTCGAATAG
CCACTTGAA---
 A C G T A C G T C T G A A G T C A C G T A G T C A C T G C G T A C T G A G A C T C G T A A C T G
T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ACTCGAATAG
ATTTGAATT-
 C T G A A G T C A C G T A G T C A C T G C G T A C T G A G A C T C G T A A C T G
C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:5
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---ACTCGAATAG
RSCACTYRAG---
 A C G T A C G T A C G T C T G A A G T C A C G T A G T C A C T G C G T A C T G A G A C T C G T A A C T G
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:6
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---ACTCGAATAG
NSCACTYVAV---
 A C G T A C G T A C G T C T G A A G T C A C G T A G T C A C T G C G T A C T G A G A C T C G T A A C T G
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:ACTCGAATAG
--TGGAAAA-
 C T G A A G T C A C G T A G T C A C T G C G T A C T G A G A C T C G T A A C T G
A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:8
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------ACTCGAATAG
TAAGCCACTTGAAATT
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G T C A C G T A G T C A C T G C G T A C T G A G A C T C G T A A C T G
A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:9
Score:0.53
Offset:3
Orientation:forward strand
Alignment:ACTCGAATAG-
---CTAATKGV
 C T G A A G T C A C G T A G T C A C T G C G T A C T G A G A C T C G T A A C T G A C G T
A C G T A C G T A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C

Barhl1/MA0877.1/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:forward strand
Alignment:ACTCGAATAG--
--GCTAATTGCT
 C T G A A G T C A C G T A G T C A C T G C G T A C T G A G A C T C G T A A C T G A C G T A C G T
A C G T A C G T A T C G G A T C G C A T C G T A C T G A C G A T A G C T C T A G A T G C A G C T