Information for 9-GTCAAAACAGGGC (Motif 15)

A C T G A C G T A G T C C G T A C G T A C G T A C T G A A G T C C G T A A C T G A C T G A T C G A G T C
Reverse Opposite:
A C T G A T G C A G T C A G T C A C G T A C T G A G C T A C G T A C G T A C G T C T A G G T C A A G T C
p-value:1e-8
log p-value:-1.965e+01
Information Content per bp:1.930
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif6.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.7 +/- 21.2bp
Average Position of motif in Background45.8 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0121.1_Foxj3_2/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GTCAAAACAGGGC-
AACACCAAAACAAAGGA
 A C G T A C G T A C G T A C T G A C G T A G T C C G T A C G T A C G T A C T G A A G T C C G T A A C T G A C T G A T C G A G T C A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

PB0141.1_Isgf3g_2/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GTCAAAACAGGGC--
-GCAAAACATTACTA
 A C T G A C G T A G T C C G T A C G T A C G T A C T G A A G T C C G T A A C T G A C T G A T C G A G T C A C G T A C G T
A C G T A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A

PB0120.1_Foxj1_2/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GTCAAAACAGGGC
ATGTCACAACAACAC
 A C G T A C G T A C T G A C G T A G T C C G T A C G T A C G T A C T G A A G T C C G T A A C T G A C T G A T C G A G T C
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GTCAAAACAGGGC-
GGTCANYTGAGGWCA
 A C G T A C T G A C G T A G T C C G T A C G T A C G T A C T G A A G T C C G T A A C T G A C T G A T C G A G T C A C G T
C T A G C A T G A C G T A G T C G C T A A G C T A G T C A G C T T C A G C T G A A C T G C A T G G C A T A T G C C G T A

Foxo1/MA0480.1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GTCAAAACAGGGC
-TGTAAACAGGA-
 A C T G A C G T A G T C C G T A C G T A C G T A C T G A A G T C C G T A A C T G A C T G A T C G A G T C
A C G T C G A T C T A G C G A T G T C A C G T A C G T A A G T C C G T A T C A G T A C G G T C A A C G T

Rarg(var.2)/MA0860.1/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GTCAAAACAGGGC-
AAGGTCACGAAAGGTCA
 A C G T A C G T A C G T A C T G A C G T A G T C C G T A C G T A C G T A C T G A A G T C C G T A A C T G A C T G A T C G A G T C A C G T
C T G A T C G A A T C G A C T G A C G T G T A C T C G A G T A C A T C G T C G A T C G A T C G A A C T G A C T G G C A T G A T C T C G A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GTCAAAACAGGGC-
--CACAGCAGGGGG
 A C T G A C G T A G T C C G T A C G T A C G T A C T G A A G T C C G T A A C T G A C T G A T C G A G T C A C G T
A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Gfi1b/MA0483.1/Jaspar

Match Rank:8
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GTCAAAACAGGGC-
---AAATCACAGCA
 A C T G A C G T A G T C C G T A C G T A C G T A C T G A A G T C C G T A A C T G A C T G A T C G A G T C A C G T
A C G T A C G T A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

SMAD3/MA0795.1/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GTCAAAACAGGGC
CGTCTAGACA----
 A C G T A C T G A C G T A G T C C G T A C G T A C G T A C T G A A G T C C G T A A C T G A C T G A T C G A G T C
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T A C G T A C G T A C G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GTCAAAACAGGGC-
ATATCAAAACAAAACA
 A C G T A C G T A C T G A C G T A G T C C G T A C G T A C G T A C T G A A G T C C G T A A C T G A C T G A T C G A G T C A C G T
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A