Information for 2-CCTTGCCCTACGCCCG (Motif 8)

A G T C A G T C A G C T C G A T A C T G A G T C A G T C A G T C A C G T G T C A A T G C A T C G A G T C A G T C A G T C A C T G
Reverse Opposite:
A G T C A C T G A C T G A C T G A T G C A T C G A C G T G T C A C T A G A C T G A C T G A G T C C G T A C T G A C T A G A C T G
p-value:1e-10
log p-value:-2.439e+01
Information Content per bp:1.865
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.6 +/- 33.1bp
Average Position of motif in Background28.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:1
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CCTTGCCCTACGCCCG
--NTGCCCTTGGGCGN
 A G T C A G T C A G C T C G A T A C T G A G T C A G T C A G T C A C G T G T C A A T G C A T C G A G T C A G T C A G T C A C T G
A C G T A C G T G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:2
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CCTTGCCCTACGCCCG
TGACCTTGACCT-------
 A C G T A C G T A C G T A G T C A G T C A G C T C G A T A C T G A G T C A G T C A G T C A C G T G T C A A T G C A T C G A G T C A G T C A G T C A C T G
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CCTTGCCCTACGCCCG-
---TGACCTTTGCCCTA
 A G T C A G T C A G C T C G A T A C T G A G T C A G T C A G T C A C G T G T C A A T G C A T C G A G T C A G T C A G T C A C T G A C G T
A C G T A C G T A C G T A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:4
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CCTTGCCCTACGCCCG
TGACCTTTGCCCTAN-----
 A C G T A C G T A C G T A C G T A G T C A G T C A G C T C G A T A C T G A G T C A G T C A G T C A C G T G T C A A T G C A T C G A G T C A G T C A G T C A C T G
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C A C G T A C G T A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:5
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CCTTGCCCTACGCCCG
---CGCCTCAGGCA--
 A G T C A G T C A G C T C G A T A C T G A G T C A G T C A G T C A C G T G T C A A T G C A T C G A G T C A G T C A G T C A C T G
A C G T A C G T A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:6
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CCTTGCCCTACGCCCG
---TGCCCCCGGGCA-
 A G T C A G T C A G C T C G A T A C T G A G T C A G T C A G T C A C G T G T C A A T G C A T C G A G T C A G T C A G T C A C T G
A C G T A C G T A C G T G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T

PB0143.1_Klf7_2/Jaspar

Match Rank:7
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CCTTGCCCTACGCCCG----
---AAGCATACGCCCAACTT
 A G T C A G T C A G C T C G A T A C T G A G T C A G T C A G T C A C G T G T C A A T G C A T C G A G T C A G T C A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G C A T C G A C T A G A G T C C G T A C G A T G T C A A G T C C T A G T A G C T A G C G A T C G T C A C G T A G T A C G C A T C A G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CCTTGCCCTACGCCCG
NNACTTGCCTT-------
 A C G T A C G T A G T C A G T C A G C T C G A T A C T G A G T C A G T C A G T C A C G T G T C A A T G C A T C G A G T C A G T C A G T C A C T G
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:9
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CCTTGCCCTACGCCCG
TGACCTTGACCT-------
 A C G T A C G T A C G T A G T C A G T C A G C T C G A T A C T G A G T C A G T C A G T C A C G T G T C A A T G C A T C G A G T C A G T C A G T C A C T G
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:10
Score:0.52
Offset:3
Orientation:forward strand
Alignment:CCTTGCCCTACGCCCG
---AGCCTCAGGCA--
 A G T C A G T C A G C T C G A T A C T G A G T C A G T C A G T C A C G T G T C A A T G C A T C G A G T C A G T C A G T C A C T G
A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T