Information for 8-ACAWGCTMTGKRG (Motif 6)

C G T A A G T C C G T A C G A T A T C G A G T C A C G T G T C A A C G T A C T G A C G T C T A G A C T G
Reverse Opposite:
A G T C A G T C G T C A A G T C C G T A A C G T C G T A C T A G A T G C C G T A C G A T A C T G A C G T
p-value:1e-16
log p-value:-3.687e+01
Information Content per bp:1.873
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.6 +/- 28.6bp
Average Position of motif in Background63.5 +/- 16.4bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0205.1_Zic1_2/Jaspar

Match Rank:1
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ACAWGCTMTGKRG
TNTCCTGCTGTGNNG
 A C G T A C G T C G T A A G T C C G T A C G A T A T C G A G T C A C G T G T C A A C G T A C T G A C G T C T A G A C T G
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

PB0206.1_Zic2_2/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--ACAWGCTMTGKRG
TCNCCTGCTGNGNNN
 A C G T A C G T C G T A A G T C C G T A C G A T A T C G A G T C A C G T G T C A A C G T A C T G A C G T C T A G A C T G
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--ACAWGCTMTGKRG
NNTCCTGCTGTGNNN
 A C G T A C G T C G T A A G T C C G T A C G A T A T C G A G T C A C G T G T C A A C G T A C T G A C G T C T A G A C T G
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Nr2e3/MA0164.1/Jaspar

Match Rank:4
Score:0.53
Offset:1
Orientation:forward strand
Alignment:ACAWGCTMTGKRG
-CAAGCTT-----
 C G T A A G T C C G T A C G A T A T C G A G T C A C G T G T C A A C G T A C T G A C G T C T A G A C T G
A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.53
Offset:1
Orientation:forward strand
Alignment:ACAWGCTMTGKRG
-CCTGCTGAGH--
 C G T A A G T C C G T A C G A T A T C G A G T C A C G T G T C A A C G T A C T G A C G T C T A G A C T G
A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--ACAWGCTMTGKRG
CCCCCTGCTGTG---
 A C G T A C G T C G T A A G T C C G T A C G A T A T C G A G T C A C G T G T C A A C G T A C T G A C G T C T A G A C T G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:ACAWGCTMTGKRG----
-----NNHTGTGGTTWN
 C G T A A G T C C G T A C G A T A T C G A G T C A C G T G T C A A C G T A C T G A C G T C T A G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.51
Offset:5
Orientation:forward strand
Alignment:ACAWGCTMTGKRG---
-----GTCTGTGGTTT
 C G T A A G T C C G T A C G A T A T C G A G T C A C G T G T C A A C G T A C T G A C G T C T A G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:ACAWGCTMTGKRG
---NGCTN-----
 C G T A A G T C C G T A C G A T A T C G A G T C A C G T G T C A A C G T A C T G A C G T C T A G A C T G
A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:ACAWGCTMTGKRG-------
YCAGGCWCAGTACCAGGCTC
 C G T A A G T C C G T A C G A T A T C G A G T C A C G T G T C A A C G T A C T G A C G T C T A G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C