Information for 17-GTGGCAGCTTCCA (Motif 17)

A C T G A C G T A C T G A C T G G T A C C G T A A C T G A G T C A C G T A C G T A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G G T C A C G T A A C T G A G T C A C G T A C T G A G T C A G T C C G T A T G A C
p-value:1e-6
log p-value:-1.394e+01
Information Content per bp:1.943
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.36%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.0 +/- 20.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TGIF1/MA0796.1/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GTGGCAGCTTCCA
-TGACAGCTGTCA
 A C T G A C G T A C T G A C T G G T A C C G T A A C T G A G T C A C G T A C G T A G T C A G T C C G T A
A C G T G C A T T C A G T C G A A G T C T C G A A C T G T A G C A G C T T A C G G C A T G T A C C G T A

TGIF2/MA0797.1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GTGGCAGCTTCCA
-TGACAGCTGTCA
 A C T G A C G T A C T G A C T G G T A C C G T A A C T G A G T C A C G T A C G T A G T C A G T C C G T A
A C G T G C A T T A C G C T G A G A T C C T G A A T C G G T A C G A C T C T A G G A C T G A T C C G T A

PKNOX1/MA0782.1/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GTGGCAGCTTCCA
-TGACAGGTGTCA
 A C T G A C G T A C T G A C T G G T A C C G T A A C T G A G T C A C G T A C G T A G T C A G T C C G T A
A C G T G A C T T A C G C T G A G T A C C T G A C A T G T A C G A G C T T C A G G C A T T A G C C G T A

PB0003.1_Ascl2_1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GTGGCAGCTTCCA--
NNNNAGCAGCTGCTGAN
 A C G T A C G T A C T G A C G T A C T G A C T G G T A C C G T A A C T G A G T C A C G T A C G T A G T C A G T C C G T A A C G T A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTGGCAGCTTCCA
NNAGCAGCTGCT-
 A C T G A C G T A C T G A C T G G T A C C G T A A C T G A G T C A C G T A C G T A G T C A G T C C G T A
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A C G T

PKNOX2/MA0783.1/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GTGGCAGCTTCCA
-TGACACCTGTCA
 A C T G A C G T A C T G A C T G G T A C C G T A A C T G A G T C A C G T A C G T A G T C A G T C C G T A
A C G T G A C T A C T G C T G A A G T C C T G A A T G C G T A C G C A T C T A G G A C T A T G C G C T A

Myod1/MA0499.1/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GTGGCAGCTTCCA
NGNGACAGCTGCN-
 A C G T A C T G A C G T A C T G A C T G G T A C C G T A A C T G A G T C A C G T A C G T A G T C A G T C C G T A
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T

Myb/MA0100.2/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GTGGCAGCTTCCA
-TGGCAGTTGN--
 A C T G A C G T A C T G A C T G G T A C C G T A A C T G A G T C A C G T A C G T A G T C A G T C C G T A
A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G A C G T A C G T

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GTGGCAGCTTCCA---
NNTTCTGGAANNTTCTAGAA
 A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C T G G T A C C G T A A C T G A G T C A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C G T
A T G C T A G C A G C T A G C T T G A C G A C T T C A G T A C G G T C A C T G A A T C G T A G C G A C T C A G T A G T C A G C T T C G A A T C G T G C A T G C A

Ascl2/MA0816.1/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GTGGCAGCTTCCA
--AGCAGCTGCT-
 A C T G A C G T A C T G A C T G G T A C C G T A A C T G A G T C A C G T A C G T A G T C A G T C C G T A
A C G T A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T