Information for 5-CGCTTTTCCGACAGAG (Motif 17)

G T A C A C T G A G T C A C G T A C G T A C G T A G C T A G T C A G T C A C T G C G T A A G T C C T G A A T C G C T G A A C T G
Reverse Opposite:
A G T C A G C T A T G C A G C T A C T G A C G T G T A C A C T G C T A G C T G A G T C A C G T A C G T A A C T G G T A C A C T G
p-value:1e-9
log p-value:-2.173e+01
Information Content per bp:1.907
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.2 +/- 17.6bp
Average Position of motif in Background24.5 +/- 9.3bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F8/MA0865.1/Jaspar

Match Rank:1
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CGCTTTTCCGACAGAG
---TTTCCCGCCAAA-
 G T A C A C T G A G T C A C G T A C G T A C G T A G C T A G T C A G T C A C T G C G T A A G T C C T G A A T C G C T G A A C T G
A C G T A C G T A C G T G A C T A G C T A C G T A G T C A G T C A T G C T A C G A G T C T A G C C T G A C G T A G C T A A C G T

HOXC12/MA0906.1/Jaspar

Match Rank:2
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CGCTTTTCCGACAGAG
--NTTTTACGACC---
 G T A C A C T G A G T C A C G T A C G T A C G T A G C T A G T C A G T C A C T G C G T A A G T C C T G A A T C G C T G A A C T G
A C G T A C G T C G A T C A G T C G A T G C A T C G A T T C G A A G T C C A T G C T G A A G T C G A T C A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:3
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CGCTTTTCCGACAGAG
---TTTTCCA------
 G T A C A C T G A G T C A C G T A C G T A C G T A G C T A G T C A G T C A C T G C G T A A G T C C T G A A T C G C T G A A C T G
A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

PH0077.1_Hoxd12/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CGCTTTTCCGACAGAG
NNNATTTTACGACNNTN
 A C G T G T A C A C T G A G T C A C G T A C G T A C G T A G C T A G T C A G T C A C T G C G T A A G T C C T G A A T C G C T G A A C T G
G T C A C G T A C T A G C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T A G

HOXD11/MA0908.1/Jaspar

Match Rank:5
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CGCTTTTCCGACAGAG
--NTTTTACGAC----
 G T A C A C T G A G T C A C G T A C G T A C G T A G C T A G T C A G T C A C T G C G T A A G T C C T G A A T C G C T G A A C T G
A C G T A C G T C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C A C G T A C G T A C G T A C G T

PH0076.1_Hoxd11/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CGCTTTTCCGACAGAG
ANNATTTTACGACNTNA
 A C G T G T A C A C T G A G T C A C G T A C G T A C G T A G C T A G T C A G T C A C T G C G T A A G T C C T G A A T C G C T G A A C T G
G T C A C T A G C T A G C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T G A

HOXC11/MA0651.1/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CGCTTTTCCGACAGAG
--NTTTTACGACC---
 G T A C A C T G A G T C A C G T A C G T A C G T A G C T A G T C A G T C A C T G C G T A A G T C C T G A A T C G C T G A A C T G
A C G T A C G T C G T A C G A T C A G T C G A T G C A T C G T A A G T C C T A G C T G A A G T C G A T C A C G T A C G T A C G T

PH0065.1_Hoxc10/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CGCTTTTCCGACAGAG
ANNTTTTACGACNTNN
 G T A C A C T G A G T C A C G T A C G T A C G T A G C T A G T C A G T C A C T G C G T A A G T C C T G A A T C G C T G A A C T G
T G C A T A G C C T A G G C A T C A G T C G A T C G A T C G T A A G T C A C T G C T G A A G T C G A C T G C A T G C A T C G T A

E2F7/MA0758.1/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CGCTTTTCCGACAGAG
--TTTTCCCGCCAAAA
 G T A C A C T G A G T C A C G T A C G T A C G T A G C T A G T C A G T C A C T G C G T A A G T C C T G A A T C G C T G A A C T G
A C G T A C G T C G A T C G A T A G C T A G C T A T G C A T G C A G T C T C A G A G T C A T G C C G T A C G T A G C T A C G T A

PH0066.1_Hoxc11/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CGCTTTTCCGACAGAG
NNNTTTTACGACNTTN
 G T A C A C T G A G T C A C G T A C G T A C G T A G C T A G T C A G T C A C T G C G T A A G T C C T G A A T C G C T G A A C T G
G T A C G A C T C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C T G A