Information for 7-AATTATTACTTTC (Motif 9)

C G T A C G T A A C G T A C G T C G T A A C G T A C G T C G T A A G T C A C G T A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A C G T A A C T G A C G T C G T A C G T A A C G T C G T A C G T A A C G T A C G T
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets20.0 +/- 0.0bp
Average Position of motif in Background58.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0010.1_Homeobox_class/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:AATTATTACTTTC
AATTATT------
 C G T A C G T A A C G T A C G T C G T A A C G T A C G T C G T A A G T C A C G T A C G T A C G T A G T C
G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

PH0172.1_Tlx2/Jaspar

Match Rank:2
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----AATTATTACTTTC
TAATTAATTAATAACTA-
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G T A A C G T A C G T C G T A A G T C A C G T A C G T A C G T A G T C
A C G T G C T A C T G A C G A T G A C T C G T A C G T A G A C T G A C T C T G A C G T A G C A T C G T A C T G A G A T C C G A T C G A T A C G T

PH0019.1_Dbx2/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AATTATTACTTTC-
NAATTAATTAATTNNN
 A C G T A C G T C G T A C G T A A C G T A C G T C G T A A C G T A C G T C G T A A G T C A C G T A C G T A C G T A G T C A C G T
C A T G C G T A T G C A G C A T G A C T G T C A G C T A G A C T G C A T C T G A C G T A G C A T C A G T C T G A G T C A T C G A

PH0018.1_Dbx1/Jaspar

Match Rank:4
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----AATTATTACTTTC
TAATTAATTAATAATTA-
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G T A A C G T A C G T C G T A A G T C A C G T A C G T A C G T A G T C
G A C T G C T A C T G A G C A T G C A T G C T A C G T A G C A T G C A T C G T A G C T A G C A T C G T A T C G A C G A T C G A T C T G A A C G T

Lhx3/MA0135.1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AATTATTACTTTC
GATTAATTAATTT-
 A C G T C G T A C G T A A C G T A C G T C G T A A C G T A C G T C G T A A G T C A C G T A C G T A C G T A G T C
T C A G C T G A G C A T C G A T C T G A C G T A A C G T C G A T C G T A C G T A C G A T A C G T G C A T A C G T

HNF1A/MA0046.2/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----AATTATTACTTTC
NGTTAATNATTAACN--
 A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G T A A C G T A C G T C G T A A G T C A C G T A C G T A C G T A G T C
C G T A C A T G A G C T G C A T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G A T C G A C T A C G T A C G T

PH0063.1_Hoxb8/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AATTATTACTTTC----
-TTTATTAATTGCNNGN
 C G T A C G T A A C G T A C G T C G T A A C G T A C G T C G T A A G T C A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T
A C G T G C A T G A C T A C G T C T G A C G A T G C A T C G T A C G T A A C G T C A G T C T A G G A T C G T A C T C A G A T C G C G A T

PB0064.1_Sox14_1/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AATTATTACTTTC
GCTAATTATAATTATC
 A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G T A A C G T A C G T C G T A A G T C A C G T A C G T A C G T A G T C
C A T G G A T C G A C T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C A G T G T A C

Dlx2/MA0885.1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AATTATTACTTTC
GCAATTAA-------
 A C G T A C G T C G T A C G T A A C G T A C G T C G T A A C G T A C G T C G T A A G T C A C G T A C G T A C G T A G T C
T A C G G A T C G T C A G T C A A C G T A C G T C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0028.1_En1/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AATTATTACTTTC-
GNATTAATTAGTTNNC
 A C G T A C G T C G T A C G T A A C G T A C G T C G T A A C G T A C G T C G T A A G T C A C G T A C G T A C G T A G T C A C G T
A C T G G A T C T G C A G A C T G A C T C G T A C G T A A G C T A G C T C T G A C T A G A C G T A C G T A G T C A T C G A G T C