Information for 4-AACTTGCAAAGAA (Motif 6)

C G T A C G T A A G T C A C G T A C G T A C T G A G T C C G T A C G T A C G T A A C T G C G T A C G T A
Reverse Opposite:
A C G T A C G T A G T C A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C T G A C G T A C G T
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0145.1_Mafb_2/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AACTTGCAAAGAA--
CAATTGCAAAAATAT
 C G T A C G T A A G T C A C G T A C G T A C T G A G T C C G T A C G T A C G T A A C T G C G T A C G T A A C G T A C G T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:2
Score:0.62
Offset:3
Orientation:forward strand
Alignment:AACTTGCAAAGAA
---TTCCKNAGAA
 C G T A C G T A A G T C A C G T A C G T A C T G A G T C C G T A C G T A C G T A A C T G C G T A C G T A
A C G T A C G T A C G T G A C T C A G T G A T C G A T C A C G T G A T C C T G A T A C G C G T A G T C A

Stat6/MA0520.1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AACTTGCAAAGAA--
CATTTCCTGAGAAAT
 C G T A C G T A A G T C A C G T A C G T A C T G A G T C C G T A C G T A C G T A A C T G C G T A C G T A A C G T A C G T
A T G C C G T A A G C T A C G T C G A T G T A C G A T C C G A T T A C G C T G A C A T G C G T A C T G A T G C A G A C T

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AACTTGCAAAGAA
-ANTTCTNNAGAA
 C G T A C G T A A G T C A C G T A C G T A C T G A G T C C G T A C G T A C G T A A C T G C G T A C G T A
A C G T C T G A A G C T A C G T A C G T A G T C G A C T G A C T C T G A C T G A C T A G C G T A C G T A

PB0146.1_Mafk_2/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----AACTTGCAAAGAA
GAAAAAATTGCAAGG--
 A C G T A C G T A C G T A C G T C G T A C G T A A G T C A C G T A C G T A C T G A G T C C G T A C G T A C G T A A C T G C G T A C G T A
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G A C G T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AACTTGCAAAGAA---
-ATTTGCATACAATGG
 C G T A C G T A A G T C A C G T A C G T A C T G A G T C C G T A C G T A C G T A A C T G C G T A C G T A A C G T A C G T A C G T
A C G T G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

Pou2f3/MA0627.1/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AACTTGCAAAGAA
TNTAATTTGCATACNA
 A C G T A C G T A C G T C G T A C G T A A G T C A C G T A C G T A C T G A G T C C G T A C G T A C G T A A C T G C G T A C G T A
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

PH0145.1_Pou2f3/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AACTTGCAAAGAA
TNTAATTTGCATACNA
 A C G T A C G T A C G T C G T A C G T A A G T C A C G T A C G T A C T G A G T C C G T A C G T A C G T A A C T G C G T A C G T A
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

PB0006.1_Bcl6b_1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AACTTGCAAAGAA----
-TCTTTCGAGGAATTTG
 C G T A C G T A A G T C A C G T A C G T A C T G A G T C C G T A C G T A C G T A A C T G C G T A C G T A A C G T A C G T A C G T A C G T
A C G T C G A T G A T C G A C T C G A T C G A T A G T C A C T G C G T A T C A G C A T G C G T A G C T A G A C T G C A T G A C T T A C G

PH0144.1_Pou2f2/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---AACTTGCAAAGAA
TNTAATTTGCATANNN
 A C G T A C G T A C G T C G T A C G T A A G T C A C G T A C G T A C T G A G T C C G T A C G T A C G T A A C T G C G T A C G T A
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A