Information for 2-CATGTCATCTTAT (Motif 4)

A G T C C G T A A C G T A C T G A C G T A G T C C G T A A C G T A G T C A C G T A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A C G T A A C T G C G T A A C G T A C T G C G T A A G T C C G T A A C G T A C T G
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets19.0 +/- 0.0bp
Average Position of motif in Background65.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mecom/MA0029.1/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CATGTCATCTTAT---
--TNTTATCTTATCTT
 A G T C C G T A A C G T A C T G A C G T A G T C C G T A A C G T A G T C A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G A G C T C G A T C T G A A C G T A G T C A G C T A C G T C T G A A C G T T A G C G C A T G A C T

Atf3/MA0605.1/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CATGTCATCTTAT
-ACGTCATC----
 A G T C C G T A A C G T A C T G A C G T A G T C C G T A A C G T A G T C A C G T A C G T C G T A A C G T
A C G T C T G A G A T C A C T G A C G T G T A C C G T A A G C T A T G C A C G T A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:3
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CATGTCATCTTAT
--TGTCANYT---
 A G T C C G T A A C G T A C T G A C G T A G T C C G T A A C G T A G T C A C G T A C G T C G T A A C G T
A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T A C G T A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:4
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CATGTCATCTTAT
---GTCATN----
 A G T C C G T A A C G T A C T G A C G T A G T C C G T A A C G T A G T C A C G T A C G T C G T A A C G T
A C G T A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T A C G T A C G T

XBP1/MA0844.1/Jaspar

Match Rank:5
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CATGTCATCTTAT
AATGCCACGTCATC----
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C T G A C G T A G T C C G T A A C G T A G T C A C G T A C G T C G T A A C G T
C G T A C T G A A C G T C A T G G T A C A G T C C T G A G A T C C T A G A G C T T G A C C T G A A C G T A G T C A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CATGTCATCTTAT
-NTGTCAN-----
 A G T C C G T A A C G T A C T G A C G T A G T C C G T A A C G T A G T C A C G T A C G T C G T A A C G T
A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CATGTCATCTTAT
CCTGTCAA-----
 A G T C C G T A A C G T A C T G A C G T A G T C C G T A A C G T A G T C A C G T A C G T C G T A A C G T
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T A C G T A C G T

JUN/MA0488.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CATGTCATCTTAT-
-ATGACATCATCNN
 A G T C C G T A A C G T A C T G A C G T A G T C C G T A A C G T A G T C A C G T A C G T C G T A A C G T A C G T
A C G T T C G A A C G T A C T G C T G A A T G C T G C A C G A T G T A C C G T A A G C T G A T C G C A T G C A T

CREB3/MA0638.1/Jaspar

Match Rank:9
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CATGTCATCTTAT
GTGCCACGTCATCA---
 A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C T G A C G T A G T C C G T A A C G T A G T C A C G T A C G T C G T A A C G T
T C A G A G C T C A T G G T A C A T G C C G T A A G T C C T A G G A C T T G A C C T G A A G C T G T A C T C G A A C G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CATGTCATCTTAT
-YTGWCADY----
 A G T C C G T A A C G T A C T G A C G T A G T C C G T A A C G T A G T C A C G T A C G T C G T A A C G T
A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C A C G T A C G T A C G T A C G T