Information for 1-CTTAGTAGTAGTT (Motif 3)

A G T C A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C G T C G T A A C T G A C G T A C G T
Reverse Opposite:
C G T A C G T A A G T C A C G T C G T A A G T C A C G T C G T A A G T C A C G T C G T A C G T A A C T G
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets6.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0034.1_Gbx2/Jaspar

Match Rank:1
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CTTAGTAGTAGTT
AGCGCTAATTAGCGATT
 A C G T A C G T A C G T A C G T A G T C A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C G T C G T A A C T G A C G T A C G T
C G T A T A C G T G A C T C A G A T G C A G C T G T C A G C T A C A G T A C G T C T G A T A C G A G T C T A C G C T G A A C G T C A G T

PB0129.1_Glis2_2/Jaspar

Match Rank:2
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CTTAGTAGTAGTT
TCTTTANTAATANN-
 A C G T A C G T A G T C A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C G T C G T A A C T G A C G T A C G T
A G C T A G T C C A G T G C A T C G A T C G T A C G A T G A C T G T C A C G T A G A C T T G C A G C A T C G A T A C G T

HMBOX1/MA0895.1/Jaspar

Match Rank:3
Score:0.53
Offset:6
Orientation:forward strand
Alignment:CTTAGTAGTAGTT---
------ACTAGTTAAC
 A G T C A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C

BCL6B/MA0731.1/Jaspar

Match Rank:4
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CTTAGTAGTAGTT--
TGCTTTCTAGGAATTCA
 A C G T A C G T A G T C A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C G T C G T A A C T G A C G T A C G T A C G T A C G T
A G C T C T A G A G T C A C G T A C G T A C G T A G T C A C G T C G T A A C T G A C T G C T G A C G T A A G C T A G C T T G A C T G C A

PB0032.1_IRC900814_1/Jaspar

Match Rank:5
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CTTAGTAGTAGTT
GNNATTTGTCGTAANN
 A C G T A C G T A C G T A G T C A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C G T C G T A A C T G A C G T A C G T
T C A G G A T C G C A T C G T A C G A T C G A T G A C T A C T G G A C T A G T C A C T G C A G T T C G A C T G A G C T A G C A T

PB0155.1_Osr2_2/Jaspar

Match Rank:6
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CTTAGTAGTAGTT
NNTGTAGGTAGCANNT
 A C G T A C G T A C G T A G T C A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C G T C G T A A C T G A C G T A C G T
A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T

PB0096.1_Zfp187_1/Jaspar

Match Rank:7
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CTTAGTAGTAGTT--
-TTATTAGTACATAN
 A G T C A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C G T C G T A A C T G A C G T A C G T A C G T A C G T
A C G T C A G T C G A T C G T A G A C T C G A T T C G A C T A G G A C T G C T A A G T C C T G A A G C T C T G A T C G A

PB0135.1_Hoxa3_2/Jaspar

Match Rank:8
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CTTAGTAGTAGTT
CCTTAATNGNTTTT
 A C G T A G T C A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C G T C G T A A C T G A C G T A C G T
A G T C A T G C G A C T C G A T C G T A C G T A A C G T T C A G A C T G G C A T C G A T G A C T C A G T A G C T

PB0154.1_Osr1_2/Jaspar

Match Rank:9
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---CTTAGTAGTAGTT
NNNTTAGGTAGCNTNT
 A C G T A C G T A C G T A G T C A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C G T C G T A A C T G A C G T A C G T
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T

PH0027.1_Emx2/Jaspar

Match Rank:10
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----CTTAGTAGTAGTT
ACCACTAATTAGTGGAC
 A C G T A C G T A C G T A C G T A G T C A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C G T C G T A A C T G A C G T A C G T
G C T A T A G C T G A C T C G A A G T C G A C T G T C A G C T A C A G T A C G T C T G A T C A G A G C T A C T G T A C G G C T A A G T C