Information for 12-TCTAATTATC (Motif 21)

A C G T A G T C A C G T C G T A C G T A A C G T A C G T C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T C G T A C G T A A C G T A C G T C G T A A C T G C G T A
p-value:1e-3
log p-value:-7.139e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif36.4
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets81.0 +/- 0.0bp
Average Position of motif in Background50.6 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

VSX2/MA0726.1/Jaspar

Match Rank:1
Score:0.81
Offset:1
Orientation:forward strand
Alignment:TCTAATTATC
-CTAATTAG-
 A C G T A G T C A C G T C G T A C G T A A C G T A C G T C G T A A C G T A G T C
A C G T A G T C G A C T G C T A T G C A G A C T G C A T C T G A A C T G A C G T

VSX1/MA0725.1/Jaspar

Match Rank:2
Score:0.81
Offset:1
Orientation:forward strand
Alignment:TCTAATTATC
-CTAATTAT-
 A C G T A G T C A C G T C G T A C G T A A C G T A C G T C G T A A C G T A G T C
A C G T G A T C G A C T G T C A T C G A G A C T C A G T C T G A A C G T A C G T

Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer

Match Rank:3
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:TCTAATTATC
NCTAATTA--
 A C G T A G T C A C G T C G T A C G T A A C G T A C G T C G T A A C G T A G T C
T A C G A G T C A G C T G T C A C G T A A C G T A C G T C T G A A C G T A C G T

LBX1/MA0618.1/Jaspar

Match Rank:4
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:TCTAATTATC
-CTAATTAA-
 A C G T A G T C A C G T C G T A C G T A A C G T A C G T C G T A A C G T A G T C
A C G T T A G C A G C T G C T A C T G A A C G T A C G T C T G A G C T A A C G T

ALX3/MA0634.1/Jaspar

Match Rank:5
Score:0.79
Offset:0
Orientation:forward strand
Alignment:TCTAATTATC
TCTAATTAAA
 A C G T A G T C A C G T C G T A C G T A A C G T A C G T C G T A A C G T A G T C
G A C T A G T C G A C T C T G A G T C A G C A T G A C T G C T A T C G A T G C A

MEOX1/MA0661.1/Jaspar

Match Rank:6
Score:0.79
Offset:0
Orientation:forward strand
Alignment:TCTAATTATC
GCTAATTAAC
 A C G T A G T C A C G T C G T A C G T A A C G T A C G T C G T A A C G T A G T C
T C A G T A G C G A C T T G C A C G T A G A C T A C G T C T G A G T C A T A G C

LHX2/MA0700.1/Jaspar

Match Rank:7
Score:0.79
Offset:0
Orientation:forward strand
Alignment:TCTAATTATC
ACTAATTAAC
 A C G T A G T C A C G T C G T A C G T A A C G T A C G T C G T A A C G T A G T C
T C G A A G T C G A C T G T C A C T G A A C G T A C G T C T G A C T G A A T G C

VAX1/MA0722.1/Jaspar

Match Rank:8
Score:0.78
Offset:1
Orientation:forward strand
Alignment:TCTAATTATC
-CTAATTAC-
 A C G T A G T C A C G T C G T A C G T A A C G T A C G T C G T A A C G T A G T C
A C G T A G T C G A C T G T C A G T C A C G A T C A G T C T G A G A T C A C G T

Dlx1/MA0879.1/Jaspar

Match Rank:9
Score:0.78
Offset:0
Orientation:forward strand
Alignment:TCTAATTATC
CCTAATTATC
 A C G T A G T C A C G T C G T A C G T A A C G T A C G T C G T A A C G T A G T C
T G A C T G A C G A C T T G C A G C T A C G A T A C G T G C T A A C G T A T G C

EMX2/MA0886.1/Jaspar

Match Rank:10
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:TCTAATTATC
NCTAATTANN
 A C G T A G T C A C G T C G T A C G T A A C G T A C G T C G T A A C G T A G T C
T A C G A G T C A C G T G T C A C G T A A C G T C A G T C T G A T A C G A G T C