Information for 7-GTAGTTCATG (Motif 20)

A C T G A C G T C G T A A C T G A C G T A C G T A G T C C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T A C T G C G T A C G T A A G T C A C G T C G T A A G T C
p-value:1e-3
log p-value:-8.777e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif7.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets12.0 +/- 0.0bp
Average Position of motif in Background58.6 +/- 22.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0083.1_Irx3_1/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GTAGTTCATG------
ANTATTACATGTANNNN
 A C G T A C T G A C G T C G T A A C T G A C G T A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C T A G G C A T G C T A A C G T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A A G C T G C A T G A C T G C A T

PB0096.1_Zfp187_1/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GTAGTTCATG-
TTATTAGTACATAN
 A C G T A C G T A C G T A C T G A C G T C G T A A C T G A C G T A C G T A G T C C G T A A C G T A C T G A C G T
C A G T C G A T C G T A G A C T C G A T T C G A C T A G G A C T G C T A A G T C C T G A A G C T C T G A T C G A

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:3
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GTAGTTCATG----
--AGGTCAAGGTCA
 A C T G A C G T C G T A A C T G A C G T A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

RORA(var.2)/MA0072.1/Jaspar

Match Rank:4
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----GTAGTTCATG
TATAAGTAGGTCAA-
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C T G A C G T A C G T A G T C C G T A A C G T A C T G
C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GTAGTTCATG-----
-ACATTCATGACACG
 A C T G A C G T C G T A A C T G A C G T A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GTAGTTCATG--
--ATTTCCTGTN
 A C T G A C G T C G T A A C T G A C G T A C G T A G T C C G T A A C G T A C T G A C G T A C G T
A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

PB0161.1_Rxra_2/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GTAGTTCATG--
TCGCGAAGGTTGTACT
 A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C T G A C G T A C G T A G T C C G T A A C G T A C T G A C G T A C G T
C A G T T G A C T C A G G T A C T C A G G C T A G C T A C T A G A C T G A C G T A G C T T C A G A G C T C G T A G T A C C A G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GTAGTTCATG
AAYTAGGTCA--
 A C G T A C G T A C T G A C G T C G T A A C T G A C G T A C G T A G T C C G T A A C G T A C T G
G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GTAGTTCATG--
--ATTTCCTGTN
 A C T G A C G T C G T A A C T G A C G T A C G T A G T C C G T A A C G T A C T G A C G T A C G T
A C G T A C G T C T G A A G C T A C G T A C G T A G T C A G T C A C G T A C T G G A C T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GTAGTTCATG
--AGGTCA--
 A C T G A C G T C G T A A C T G A C G T A C G T A G T C C G T A A C G T A C T G
A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T