Information for 9-CACGTATTTTGTACTA (Motif 16)

A G T C C G T A A G T C A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G A C G T C G T A A G T C C G T A C G T A C G T A C G T A A C G T C G T A A G T C A C T G A C G T A C T G
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:1
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CACGTATTTTGTACTA
GCACGTAY---------
 A C G T A G T C C G T A A G T C A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C G T C G T A
C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CACGTATTTTGTACTA
GCACGTACCC-------
 A C G T A G T C C G T A A G T C A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C G T C G T A
C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:3
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CACGTATTTTGTACTA
BGCACGTA----------
 A C G T A C G T A G T C C G T A A G T C A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C G T C G T A
A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0106.1_Arid5a_2/Jaspar

Match Rank:4
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CACGTATTTTGTACTA
TNNTTTCGTATTNNANN---
 A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C G T C G T A
A C G T A G C T T C G A G C A T G A C T G A C T A T G C A T C G A C G T T G C A A C G T C G A T A C T G G C A T C T G A G A C T T A C G A C G T A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CACGTATTTTGTACTA
GCACGTNC---------
 A C G T A G T C C G T A A G T C A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C G T C G T A
A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0129.1_Glis2_2/Jaspar

Match Rank:6
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CACGTATTTTGTACTA--
----TCTTTANTAATANN
 A G T C C G T A A G T C A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A G T C C A G T G C A T C G A T C G T A C G A T G A C T G T C A C G T A G A C T T G C A G C A T C G A T

PB0096.1_Zfp187_1/Jaspar

Match Rank:7
Score:0.53
Offset:6
Orientation:forward strand
Alignment:CACGTATTTTGTACTA----
------TTATGTACTAATAA
 A G T C C G T A A G T C A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T G A C T T C G A G A C T C T A G C G A T C T G A A G T C A G C T G C T A C G T A C G A T C G T A G T C A

CLOCK/MA0819.1/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CACGTATTTTGTACTA
AACACGTGTT--------
 A C G T A C G T A G T C C G T A A G T C A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C G T C G T A
C T G A T C G A T G A C T C G A A G T C C T A G A G C T A C T G A G C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0161.1_Rxra_2/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CACGTATTTTGTACTA
TCGCGAAGGTTGTACT-
 A C G T A G T C C G T A A G T C A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C G T C G T A
C A G T T G A C T C A G G T A C T C A G G C T A G C T A C T A G A C T G A C G T A G C T T C A G A G C T C G T A G T A C C A G T A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:10
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CACGTATTTTGTACTA---
----NNNTTTNTAATACNG
 A G T C C G T A A G T C A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G