Information for 1-TCAGAGAGCG (Motif 1)

A C G T A G T C C G T A A C T G C G T A A C T G C G T A A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C A C G T A G T C A C G T A G T C A C G T A C T G C G T A
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets65.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TCAGAGAGCG----
TCAGNGAGCGTGAC
 A C G T A G T C C G T A A C T G C G T A A C T G C G T A A C T G A G T C A C T G A C G T A C G T A C G T A C G T
A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C

PB0140.1_Irf6_2/Jaspar

Match Rank:2
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TCAGAGAGCG--
NNNACCGAGAGTNNN
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C T G C G T A A C T G A G T C A C T G A C G T A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.56
Offset:5
Orientation:forward strand
Alignment:TCAGAGAGCG
-----CAGCC
 A C G T A G T C C G T A A C T G C G T A A C T G C G T A A C T G A G T C A C T G
A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:4
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TCAGAGAGCG
GGTTAGAGACCT
 A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C T G C G T A A C T G A G T C A C T G
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T

PB0138.1_Irf4_2/Jaspar

Match Rank:5
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TCAGAGAGCG--
GNNACCGAGAATNNN
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C T G C G T A A C T G A G T C A C T G A C G T A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

NR2C2/MA0504.1/Jaspar

Match Rank:6
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----TCAGAGAGCG
AGGGGTCAGAGGTCA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C T G C G T A A C T G A G T C A C T G
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TCAGAGAGCG
GRTGMTRGAGCC
 A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C T G C G T A A C T G A G T C A C T G
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C

TCF7L2/MA0523.1/Jaspar

Match Rank:8
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----TCAGAGAGCG
AAAGATCAAAGGAA-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C T G C G T A A C T G A G T C A C T G
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:9
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---TCAGAGAGCG
ACATCAAAGGNA-
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C T G C G T A A C T G A G T C A C T G
C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A A C G T

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:TCAGAGAGCG
---CGGAGC-
 A C G T A G T C C G T A A C T G C G T A A C T G C G T A A C T G A G T C A C T G
A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T