Information for 7-KYRSYRRGWRKCCTTT (Motif 8)

C A T G A G C T C T G A A T C G A G T C C T A G C T A G A C T G C G T A C T G A A C G T A G T C A G T C A C G T A C G T A C G T
Reverse Opposite:
G T C A C G T A C G T A A C T G A C T G G T C A A G C T G C A T A G T C A G T C G A T C C T A G A T G C A G C T T C A G G T A C
p-value:1e-7
log p-value:-1.823e+01
Information Content per bp:1.753
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.5 +/- 29.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0053.1_Rara_1/Jaspar

Match Rank:1
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:KYRSYRRGWRKCCTTT----
----NNNGTGACCTTTGNNN
 C A T G A G C T C T G A A T C G A G T C C T A G C T A G A C T G C G T A C T G A A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:2
Score:0.61
Offset:8
Orientation:forward strand
Alignment:KYRSYRRGWRKCCTTT----
--------TGACCTTTNCNT
 C A T G A G C T C T G A A T C G A G T C C T A G C T A G A C T G C G T A C T G A A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

NR4A2/MA0160.1/Jaspar

Match Rank:3
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:KYRSYRRGWRKCCTTT
-------GTGACCTT-
 C A T G A G C T C T G A A T C G A G T C C T A G C T A G A C T G C G T A C T G A A C G T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:4
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:KYRSYRRGWRKCCTTT
------BNTGDCCTTG
 C A T G A G C T C T G A A T C G A G T C C T A G C T A G A C T G C G T A C T G A A C G T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G

PB0049.1_Nr2f2_1/Jaspar

Match Rank:5
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:KYRSYRRGWRKCCTTT----
----NNNNTGACCTTTNNNN
 C A T G A G C T C T G A A T C G A G T C C T A G C T A G A C T G C G T A C T G A A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

Sox2/MA0143.3/Jaspar

Match Rank:6
Score:0.56
Offset:11
Orientation:forward strand
Alignment:KYRSYRRGWRKCCTTT---
-----------CCTTTGTT
 C A T G A G C T C T G A A T C G A G T C C T A G C T A G A C T G C G T A C T G A A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:7
Score:0.56
Offset:6
Orientation:forward strand
Alignment:KYRSYRRGWRKCCTTT--
------AGGVNCCTTTGT
 C A T G A G C T C T G A A T C G A G T C C T A G C T A G A C T G C G T A C T G A A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:8
Score:0.55
Offset:11
Orientation:forward strand
Alignment:KYRSYRRGWRKCCTTT---
-----------CCWTTGTY
 C A T G A G C T C T G A A T C G A G T C C T A G C T A G A C T G C G T A C T G A A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:KYRSYRRGWRKCCTTT-
-------CTGACCTTTG
 C A T G A G C T C T G A A T C G A G T C C T A G C T A G A C T G C G T A C T G A A C G T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

PB0166.1_Sox12_2/Jaspar

Match Rank:10
Score:0.55
Offset:8
Orientation:reverse strand
Alignment:KYRSYRRGWRKCCTTT--------
--------ANTCCTTTGTCTNNNN
 C A T G A G C T C T G A A T C G A G T C C T A G C T A G A C T G C G T A C T G A A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T