Information for 20-AAAACAAACAATT (Motif 46)

C G T A C G T A C G T A C G T A A G T C C G T A C G T A C G T A A G T C C G T A C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T
p-value:1e-3
log p-value:-8.032e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif8.33%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets92.0 +/- 0.0bp
Average Position of motif in Background57.9 +/- 20.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxd3/MA0041.1/Jaspar

Match Rank:1
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:AAAACAAACAATT
-AAACAAACATTC
 C G T A C G T A C G T A C G T A A G T C C G T A C G T A C G T A A G T C C G T A C G T A A C G T A C G T
A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

PB0066.1_Sox17_1/Jaspar

Match Rank:2
Score:0.70
Offset:3
Orientation:forward strand
Alignment:AAAACAAACAATT-----
---ATAAACAATTAAACA
 C G T A C G T A C G T A C G T A A G T C C G T A C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A

PH0006.1_Barhl2/Jaspar

Match Rank:3
Score:0.70
Offset:2
Orientation:forward strand
Alignment:AAAACAAACAATT-----
--AAAAACCAATTAAGAA
 C G T A C G T A C G T A C G T A A G T C C G T A C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A

Foxq1/MA0040.1/Jaspar

Match Rank:4
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:AAAACAAACAATT
--AATAAACAATN
 C G T A C G T A C G T A C G T A A G T C C G T A C G T A C G T A A G T C C G T A C G T A A C G T A C G T
A C G T A C G T G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A

Sox5/MA0087.1/Jaspar

Match Rank:5
Score:0.69
Offset:5
Orientation:reverse strand
Alignment:AAAACAAACAATT
-----NAACAAT-
 C G T A C G T A C G T A C G T A A G T C C G T A C G T A C G T A A G T C C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T

PH0005.1_Barhl1/Jaspar

Match Rank:6
Score:0.69
Offset:2
Orientation:forward strand
Alignment:AAAACAAACAATT-----
--AACAACCAATTAATTC
 C G T A C G T A C G T A C G T A A G T C C G T A C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T C A C T G A G T A C T C G A C T G A A T G C G A T C C T G A G C T A A C G T G A C T C G T A C T G A A C G T C G A T G A T C

PB0165.1_Sox11_2/Jaspar

Match Rank:7
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:AAAACAAACAATT--
-NNCNNAACAATTNT
 C G T A C G T A C G T A C G T A A G T C C G T A C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T

MF0005.1_Forkhead_class/Jaspar

Match Rank:8
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:AAAACAAACAATT
-AAATAAACA---
 C G T A C G T A C G T A C G T A A G T C C G T A C G T A C G T A A G T C C G T A C G T A A C G T A C G T
A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:9
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---AAAACAAACAATT-
ATAAGAACAAAGGACTA
 A C G T A C G T A C G T C G T A C G T A C G T A C G T A A G T C C G T A C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

FOXC2/MA0846.1/Jaspar

Match Rank:10
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AAAACAAACAATT
TAAGTAAACAAA-
 C G T A C G T A C G T A C G T A A G T C C G T A C G T A C G T A A G T C C G T A C G T A A C G T A C G T
G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A A C G T