Information for 24-ATCCTTGGGACCATGC (Motif 45)

C G T A A C G T A G T C A G T C A C G T A C G T A C T G A C T G A C T G C G T A A G T C A G T C C G T A A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A C G T A C T G A C T G A C G T A G T C A G T C A G T C C G T A C G T A A C T G A C T G C G T A A C G T
p-value:1e-3
log p-value:-8.725e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif8.33%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets93.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:1
Score:0.53
Offset:5
Orientation:forward strand
Alignment:ATCCTTGGGACCATGC---
-----TGGCACCATGCCAA
 C G T A A C G T A G T C A G T C A C G T A C G T A C T G A C T G A C T G C G T A A G T C A G T C C G T A A C G T A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.51
Offset:3
Orientation:forward strand
Alignment:ATCCTTGGGACCATGC---
---CTTGGCANNNTGCCAA
 C G T A A C G T A G T C A G T C A C G T A C G T A C T G A C T G A C T G C G T A A G T C A G T C C G T A A C G T A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:3
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:ATCCTTGGGACCATGC
TCCCNNGGGACN----
 C G T A A C G T A G T C A G T C A C G T A C G T A C T G A C T G A C T G C G T A A G T C A G T C C G T A A C G T A C T G A G T C
G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:4
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:ATCCTTGGGACCATGC
--NNTTGGCANN----
 C G T A A C G T A G T C A G T C A C G T A C G T A C T G A C T G A C T G C G T A A G T C A G T C C G T A A C G T A C T G A G T C
A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.49
Offset:-5
Orientation:forward strand
Alignment:-----ATCCTTGGGACCATGC
AAGATATCCTT----------
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G T C A G T C A C G T A C G T A C T G A C T G A C T G C G T A A G T C A G T C C G T A A C G T A C T G A G T C
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.48
Offset:3
Orientation:reverse strand
Alignment:ATCCTTGGGACCATGC
---CSTGGGAAAD---
 C G T A A C G T A G T C A G T C A C G T A C G T A C T G A C T G A C T G C G T A A G T C A G T C C G T A A C G T A C T G A G T C
A C G T A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T

GLI2/MA0734.1/Jaspar

Match Rank:7
Score:0.48
Offset:6
Orientation:forward strand
Alignment:ATCCTTGGGACCATGC--
------GCGACCACACTG
 C G T A A C G T A G T C A G T C A C G T A C G T A C T G A C T G A C T G C G T A A G T C A G T C C G T A A C G T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:ATCCTTGGGACCATGC
TCCCCTGGGGAC----
 C G T A A C G T A G T C A G T C A C G T A C G T A C T G A C T G A C T G C G T A A G T C A G T C C G T A A C G T A C T G A G T C
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C A C G T A C G T A C G T A C G T

EBF1/MA0154.3/Jaspar

Match Rank:9
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--ATCCTTGGGACCATGC
ATTCCCAAGGGAAT----
 A C G T A C G T C G T A A C G T A G T C A G T C A C G T A C G T A C T G A C T G A C T G C G T A A G T C A G T C C G T A A C G T A C T G A G T C
C T G A A C G T G A C T A T G C A G T C A G T C G C T A C G T A T C A G T C A G C A T G C T G A G T C A G A C T A C G T A C G T A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:10
Score:0.47
Offset:7
Orientation:reverse strand
Alignment:ATCCTTGGGACCATGC---
-------GGACCACCCACG
 C G T A A C G T A G T C A G T C A C G T A C G T A C T G A C T G A C T G C G T A A G T C A G T C C G T A A C G T A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G