Information for 18-ACTACCCAAGAAATTA (Motif 40)

C G T A A G T C A C G T C G T A A G T C A G T C A G T C C G T A C G T A A C T G C G T A C G T A C G T A A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C T G A C T G A C G T C G T A A C T G A C G T
p-value:1e-3
log p-value:-8.725e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif8.33%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets9.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:1
Score:0.56
Offset:2
Orientation:forward strand
Alignment:ACTACCCAAGAAATTA
--TTCCKNAGAA----
 C G T A A G T C A C G T C G T A A G T C A G T C A G T C C G T A C G T A A C T G C G T A C G T A C G T A A C G T A C G T C G T A
A C G T A C G T G A C T C A G T G A T C G A T C A C G T G A T C C T G A T A C G C G T A G T C A A C G T A C G T A C G T A C G T

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:2
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:ACTACCCAAGAAATTA
--TTCTNNAGAANT--
 C G T A A G T C A C G T C G T A A G T C A G T C A G T C C G T A C G T A A C T G C G T A C G T A C G T A A C G T A C G T C G T A
A C G T A C G T A C G T A C G T A G T C G A C T A G C T C T G A C T G A C T A G C G T A C G T A T C G A G A C T A C G T A C G T

Hmx1/MA0896.1/Jaspar

Match Rank:3
Score:0.55
Offset:5
Orientation:forward strand
Alignment:ACTACCCAAGAAATTA------
-----ACAAGCAATTAATGAAT
 C G T A A G T C A C G T C G T A A G T C A G T C A G T C C G T A C G T A A C T G C G T A C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:4
Score:0.55
Offset:5
Orientation:forward strand
Alignment:ACTACCCAAGAAATTA------
-----ACAAGCAATTAATGAAT
 C G T A A G T C A C G T C G T A A G T C A G T C A G T C C G T A C G T A A C T G C G T A C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

PH0108.1_Msx3/Jaspar

Match Rank:5
Score:0.55
Offset:4
Orientation:forward strand
Alignment:ACTACCCAAGAAATTA----
----CAAAACCAATTAATTT
 C G T A A G T C A C G T C G T A A G T C A G T C A G T C C G T A C G T A A C T G C G T A C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C T C G A G T C A C T G A T C G A A T G C A G T C C T G A G T C A C G A T G A C T C G T A C T G A A C G T G A C T G C A T

PH0028.1_En1/Jaspar

Match Rank:6
Score:0.55
Offset:4
Orientation:forward strand
Alignment:ACTACCCAAGAAATTA----
----GCGAACTAATTAATGC
 C G T A A G T C A C G T C G T A A G T C A G T C A G T C C G T A C G T A A C T G C G T A C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G T A G C T A C G T G C A T G C A A G T C A G C T C T G A C T G A C G A T A C G T C T G A C T G A A C G T C T A G T A G C

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--ACTACCCAAGAAATTA
GGACCACCCACG------
 A C G T A C G T C G T A A G T C A C G T C G T A A G T C A G T C A G T C C G T A C G T A A C T G C G T A C G T A C G T A A C G T A C G T C G T A
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G A C G T A C G T A C G T A C G T A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:ACTACCCAAGAAATTA
----NACAGGAAAT--
 C G T A A G T C A C G T C G T A A G T C A G T C A G T C C G T A C G T A A C T G C G T A C G T A C G T A A C G T A C G T C G T A
A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T

Hmx3/MA0898.1/Jaspar

Match Rank:9
Score:0.54
Offset:5
Orientation:forward strand
Alignment:ACTACCCAAGAAATTA------
-----ACAAGCAATTAAAGAAT
 C G T A A G T C A C G T C G T A A G T C A G T C A G T C C G T A C G T A A C T G C G T A C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A T G C T G C A T C G A C A T G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A C T A G T C G A C G T A C A G T

PH0043.1_Hmx3/Jaspar

Match Rank:10
Score:0.54
Offset:5
Orientation:forward strand
Alignment:ACTACCCAAGAAATTA------
-----ACAAGCAATTAAAGAAT
 C G T A A G T C A C G T C G T A A G T C A G T C A G T C C G T A C G T A A C T G C G T A C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A T G C T G C A T C G A C A T G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A C T A G T C G A C G T A C A G T