Information for 5-CATAAGGCCG (Motif 21)

A G T C C G T A A C G T C G T A C G T A A C T G A C T G A G T C A G T C A C T G
Reverse Opposite:
A G T C A C T G A C T G A G T C A G T C A C G T A C G T C G T A A C G T A C T G
p-value:1e-3
log p-value:-8.725e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif8.33%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets87.0 +/- 0.0bp
Average Position of motif in Background55.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NEUROD2/MA0668.1/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CATAAGGCCG
ACCATATGGC--
 A C G T A C G T A G T C C G T A A C G T C G T A C G T A A C T G A C T G A G T C A G T C A C T G
C T G A T G A C G T A C C T G A A C G T C T G A G A C T A T C G A C T G A G T C A C G T A C G T

Neurog1/MA0623.1/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CATAAGGCCG
ACCATATGGT--
 A C G T A C G T A G T C C G T A A C G T C G T A C G T A A C T G A C T G A G T C A G T C A C T G
T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A T C G G A C T A C G T A C G T

NEUROG2/MA0669.1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CATAAGGCCG
AACATATGTC--
 A C G T A C G T A G T C C G T A A C G T C G T A C G T A A C T G A C T G A G T C A G T C A C T G
T C G A T G C A G A T C C T G A A C G T T G C A G C A T A C T G A G C T A G T C A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:4
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CATAAGGCCG-------
---CAGGCCNNGGCCNN
 A G T C C G T A A C G T C G T A C G T A A C T G A C T G A G T C A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

Bhlha15/MA0607.1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CATAAGGCCG
ACATATGG---
 A C G T A G T C C G T A A C G T C G T A C G T A A C T G A C T G A G T C A G T C A C T G
T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G A C G T A C G T A C G T

Atoh1/MA0461.2/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CATAAGGCCG
AACATATGTT--
 A C G T A C G T A G T C C G T A A C G T C G T A C G T A A C T G A C T G A G T C A G T C A C T G
T C G A T G C A T G A C T C G A C A G T G T C A C G A T C A T G A C G T G A C T A C G T A C G T

Twist2/MA0633.1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CATAAGGCCG
NACATATGGN--
 A C G T A C G T A G T C C G T A A C G T C G T A C G T A A C T G A C T G A G T C A G T C A C T G
G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CATAAGGCCG--
----AGGCCTNG
 A G T C C G T A A C G T C G T A C G T A A C T G A C T G A G T C A G T C A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CATAAGGCCG
AACAKATGGY--
 A C G T A C G T A G T C C G T A A C G T C G T A C G T A A C T G A C T G A G T C A G T C A C T G
C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T A C G T A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CATAAGGCCG
CAGATAAGGN--
 A C G T A C G T A G T C C G T A A C G T C G T A C G T A A C T G A C T G A G T C A G T C A C T G
T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A A C G T A C G T