| Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
| 1 |
| ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer | 1e-3 | -8.967e+00 | 0.0464 | 174.0 | 18.51% | 6646.2 | 14.15% | motif file (matrix) |
svg |
| 2 |
| ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer | 1e-3 | -8.821e+00 | 0.0464 | 302.0 | 32.13% | 12566.1 | 26.76% | motif file (matrix) |
svg |
| 3 |
| AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer | 1e-3 | -7.035e+00 | 0.1068 | 188.0 | 20.00% | 7560.5 | 16.10% | motif file (matrix) |
svg |
| 4 |
| RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer | 1e-3 | -6.980e+00 | 0.1068 | 25.0 | 2.66% | 617.4 | 1.31% | motif file (matrix) |
svg |
| 5 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-2 | -6.042e+00 | 0.1731 | 102.0 | 10.85% | 3840.6 | 8.18% | motif file (matrix) |
svg |
| 6 |
| Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer | 1e-2 | -5.260e+00 | 0.3152 | 4.0 | 0.43% | 34.5 | 0.07% | motif file (matrix) |
svg |
| 7 |
| AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.170e+00 | 0.3152 | 146.0 | 15.53% | 5948.8 | 12.67% | motif file (matrix) |
svg |
| 8 |
| Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-2 | -4.877e+00 | 0.3466 | 4.0 | 0.43% | 39.0 | 0.08% | motif file (matrix) |
svg |
| 9 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-2 | -4.690e+00 | 0.3715 | 18.0 | 1.91% | 478.6 | 1.02% | motif file (matrix) |
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