Information for 3-CTCGGAGACC (Motif 6)

A G T C G C A T A G T C A T C G A T C G G C T A A T C G C T G A T G A C G T A C
Reverse Opposite:
A C T G A C T G A G C T A T G C C G A T A T G C T A G C C T A G C G T A A C T G
p-value:1e-9
log p-value:-2.285e+01
Information Content per bp:1.834
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.23%
Number of Background Sequences with motif172.8
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets51.0 +/- 28.7bp
Average Position of motif in Background54.2 +/- 24.8bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---CTCGGAGACC----
CTACTTGGATACGGAAT
 A C G T A C G T A C G T A G T C G C A T A G T C A T C G A T C G G C T A A T C G C T G A T G A C G T A C A C G T A C G T A C G T A C G T
A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T

PB0158.1_Rfx3_2/Jaspar

Match Rank:2
Score:0.61
Offset:-7
Orientation:forward strand
Alignment:-------CTCGGAGACC------
ACTGACCCTTGGTTACCACAAAG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G C A T A G T C A T C G A T C G G C T A A T C G C T G A T G A C G T A C A C G T A C G T A C G T A C G T A C G T A C G T
T G C A A G T C A C G T A T C G G C T A A T G C T A C G A T G C G C A T C G A T T C A G A C T G C G A T C A G T C G T A G A T C T G A C T C G A T G A C T C G A T C G A C G T A A T C G

ESR2/MA0258.2/Jaspar

Match Rank:3
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CTCGGAGACC-
AGGNCANNGTGACCT
 A C G T A C G T A C G T A C G T A G T C G C A T A G T C A T C G A T C G G C T A A T C G C T G A T G A C G T A C A C G T
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T

RXRA::VDR/MA0074.1/Jaspar

Match Rank:4
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CTCGGAGACC-
TGAACCCGATGACCC
 A C G T A C G T A C G T A C G T A G T C G C A T A G T C A T C G A T C G G C T A A T C G C T G A T G A C G T A C A C G T
A G C T C T A G C G T A C G T A A G T C A G C T A G T C A C T G C G A T A G C T C T A G C G T A G T A C A G T C A G T C

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CTCGGAGACC
--CGGAGC--
 A G T C G C A T A G T C A T C G A T C G G C T A A T C G C T G A T G A C G T A C
A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CTCGGAGACC-
-ACTGAAACCA
 A G T C G C A T A G T C A T C G A T C G G C T A A T C G C T G A T G A C G T A C A C G T
A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:7
Score:0.56
Offset:-7
Orientation:reverse strand
Alignment:-------CTCGGAGACC---
NNNTGAACTCNNTGACCTCN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G C A T A G T C A T C G A T C G G C T A A T C G C T G A T G A C G T A C A C G T A C G T A C G T
G T A C G A T C G T C A G C A T T C A G G T C A G T C A G T A C A G C T A G T C C G T A T A C G G C A T T A C G T G C A G T A C G A T C G A C T A G T C G A C T

ESR1/MA0112.3/Jaspar

Match Rank:8
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CTCGGAGACC--
AAGGTCACGGTGACCTG
 A C G T A C G T A C G T A C G T A C G T A G T C G C A T A G T C A T C G A T C G G C T A A T C G C T G A T G A C G T A C A C G T A C G T
C T G A T C G A A C T G C T A G A C G T G A T C C T G A T G A C T A C G T C A G A G C T C T A G T C G A A T G C G T A C A G C T A C T G

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:9
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CTCGGAGACC----
----AAGACCCYYN
 A G T C G C A T A G T C A T C G A T C G G C T A A T C G C T G A T G A C G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CTCGGAGACC-
GGTTAGAGACCT
 A C G T A G T C G C A T A G T C A T C G A T C G G C T A A T C G C T G A T G A C G T A C A C G T
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T