Information for 2-CGTCGCGGACCTGCTC (Motif 5)

A G T C A T C G A G C T A G T C A T C G T A G C A C T G A T C G C G T A A G T C A G T C A C G T A C T G A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G A G T C C G T A A C T G C T A G C G A T A T G C A G T C A C T G A T G C A C T G C T G A A T G C A C T G
p-value:1e-10
log p-value:-2.437e+01
Information Content per bp:1.867
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.6 +/- 22.1bp
Average Position of motif in Background8.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.63
Offset:4
Orientation:forward strand
Alignment:CGTCGCGGACCTGCTC
----SNGCACCTGCHS
 A G T C A T C G A G C T A G T C A T C G T A G C A C T G A T C G C G T A A G T C A G T C A C G T A C T G A G T C A C G T A G T C
A C G T A C G T A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

SNAI2/MA0745.1/Jaspar

Match Rank:2
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:CGTCGCGGACCTGCTC
------NCACCTGTN-
 A G T C A T C G A G C T A G T C A T C G T A G C A C T G A T C G C G T A A G T C A G T C A C G T A C T G A G T C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:3
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CGTCGCGGACCTGCTC
-----CGCACCTGCT-
 A G T C A T C G A G C T A G T C A T C G T A G C A C T G A T C G C G T A A G T C A G T C A C G T A C T G A G T C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:4
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CGTCGCGGACCTGCTC
-----CGCAGCTGCG-
 A G T C A T C G A G C T A G T C A T C G T A G C A C T G A T C G C G T A A G T C A G T C A C G T A C T G A G T C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T

TCF3/MA0522.2/Jaspar

Match Rank:5
Score:0.53
Offset:5
Orientation:forward strand
Alignment:CGTCGCGGACCTGCTC
-----AACACCTGCT-
 A G T C A T C G A G C T A G T C A T C G T A G C A C T G A T C G C G T A A G T C A G T C A C G T A C T G A G T C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.52
Offset:5
Orientation:forward strand
Alignment:CGTCGCGGACCTGCTC
-----NNCACCTGNN-
 A G T C A T C G A G C T A G T C A T C G T A G C A C T G A T C G C G T A A G T C A G T C A C G T A C T G A G T C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T

PB0047.1_Myf6_1/Jaspar

Match Rank:7
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:CGTCGCGGACCTGCTC---
---CNGACACCTGTTCNNN
 A G T C A T C G A G C T A G T C A T C G T A G C A C T G A T C G C G T A A G T C A G T C A C G T A C T G A G T C A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C T A G T C A G T G C A A G T C C T G A T G A C A T G C C G A T C T A G A G C T A G C T T A G C G A C T A G C T A G T C

PB0003.1_Ascl2_1/Jaspar

Match Rank:8
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CGTCGCGGACCTGCTC---
--CTCAGCAGCTGCTACTG
 A G T C A T C G A G C T A G T C A T C G T A G C A C T G A T C G C G T A A G T C A G T C A C G T A C T G A G T C A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

ID4/MA0824.1/Jaspar

Match Rank:9
Score:0.51
Offset:5
Orientation:forward strand
Alignment:CGTCGCGGACCTGCTC
-----TACACCTGTC-
 A G T C A T C G A G C T A G T C A T C G T A G C A C T G A T C G C G T A A G T C A G T C A C G T A C T G A G T C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C A C G T

POL011.1_XCPE1/Jaspar

Match Rank:10
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:CGTCGCGGACCTGCTC
------GGTCCCGCCC
 A G T C A T C G A G C T A G T C A T C G T A G C A C T G A T C G C G T A A G T C A G T C A C G T A C T G A G T C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C