Information for 1-GCCTCCGGVAGGGCHG (Motif 4)

C A T G A G T C A G T C A C G T A G T C A G T C A C T G A C T G T C G A C T G A A C T G A C T G C T A G A T G C G A C T A C T G
Reverse Opposite:
A G T C C G T A A T C G A G T C A G T C A G T C A G C T A C G T A G T C A G T C A C T G A C T G C G T A A C T G A C T G G T A C
p-value:1e-10
log p-value:-2.437e+01
Information Content per bp:1.848
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.8 +/- 14.0bp
Average Position of motif in Background35.3 +/- 19.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gabpa/MA0062.2/Jaspar

Match Rank:1
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GCCTCCGGVAGGGCHG
----CCGGAAGTGGC-
 C A T G A G T C A G T C A C G T A G T C A G T C A C T G A C T G T C G A C T G A A C T G A C T G C T A G A T G C G A C T A C T G
A C G T A C G T A C G T A C G T T A G C T G A C A C T G A C T G T C G A G C T A T C A G G A C T T C A G T C A G T G A C A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCCTCCGGVAGGGCHG
CGCCTCAGGCA------
 A C G T C A T G A G T C A G T C A C G T A G T C A G T C A C T G A C T G T C G A C T G A A C T G A C T G C T A G A T G C G A C T A C T G
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCCTCCGGVAGGGCHG
CACCCCCGGGGGGG---
 A C G T C A T G A G T C A G T C A C G T A G T C A G T C A C T G A C T G T C G A C T G A A C T G A C T G C T A G A T G C G A C T A C T G
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G A C G T A C G T A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCCTCCGGVAGGGCHG
CCCCCCCGGGGGGGT--
 A C G T C A T G A G T C A G T C A C G T A G T C A G T C A C T G A C T G T C G A C T G A A C T G A C T G C T A G A T G C G A C T A C T G
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T A C G T A C G T

ELK4/MA0076.2/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GCCTCCGGVAGGGCHG
---NCCGGAAGTGG--
 C A T G A G T C A G T C A C G T A G T C A G T C A C T G A C T G T C G A C T G A A C T G A C T G C T A G A T G C G A C T A C T G
A C G T A C G T A C G T T C A G T A G C G T A C A C T G A C T G C G T A C G T A T C A G G A C T T A C G T A C G A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCCTCCGGVAGGGCHG
AGCCTCAGGCA------
 A C G T C A T G A G T C A G T C A C G T A G T C A G T C A C T G A C T G T C G A C T G A A C T G A C T G C T A G A T G C G A C T A C T G
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GCCTCCGGVAGGGCHG
---RCCGGAAGTD---
 C A T G A G T C A G T C A C G T A G T C A G T C A C T G A C T G T C G A C T G A A C T G A C T G C T A G A T G C G A C T A C T G
A C G T A C G T A C G T C T G A T A G C T G A C T A C G T C A G G C T A G C T A T C A G A G C T C T A G A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCCTCCGGVAGGGCHG
NGCCTNAGGCN------
 A C G T C A T G A G T C A G T C A C G T A G T C A G T C A C T G A C T G T C G A C T G A A C T G A C T G C T A G A T G C G A C T A C T G
G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GCCTCCGGVAGGGCHG
NTNGCCTCAGGCNNN----
 A C G T A C G T A C G T C A T G A G T C A G T C A C G T A G T C A G T C A C T G A C T G T C G A C T G A A C T G A C T G C T A G A T G C G A C T A C T G
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T A C G T A C G T A C G T A C G T

MF0001.1_ETS_class/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GCCTCCGGVAGGGCHG
---ACCGGAAG-----
 C A T G A G T C A G T C A C G T A G T C A G T C A C T G A C T G T C G A C T G A A C T G A C T G C T A G A T G C G A C T A C T G
A C G T A C G T A C G T C T G A T A G C T G A C C A T G C T A G C T G A G C T A T C A G A C G T A C G T A C G T A C G T A C G T