Information for 18-CAGTCGCGACTGC (Motif 30)

A G T C C T G A A C T G A C G T A G T C A C T G A G T C A C T G G T C A A G T C A G C T A C T G A T G C
Reverse Opposite:
A T C G A G T C C T G A A C T G A C G T A G T C A C T G A G T C A C T G G T C A A G T C A G C T A C T G
p-value:1e-4
log p-value:-1.028e+01
Information Content per bp:1.904
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.32%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets24.6 +/- 9.0bp
Average Position of motif in Background65.6 +/- 16.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0151.1_Myf6_2/Jaspar

Match Rank:1
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CAGTCGCGACTGC
AGCAACAGCCGCACC---
 A C G T A C G T A C G T A C G T A C G T A G T C C T G A A C T G A C G T A G T C A C T G A G T C A C T G G T C A A G T C A G C T A C T G A T G C
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C A C G T A C G T A C G T

ZBED1/MA0749.1/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CAGTCGCGACTGC
TATGTCGCGATAG-
 A C G T A G T C C T G A A C T G A C G T A G T C A C T G A G T C A C T G G T C A A G T C A G C T A C T G A T G C
G A C T T G C A C G A T C T A G A G C T A G T C C T A G A G T C T C A G C T G A A G C T G C T A C A T G A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:3
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CAGTCGCGACTGC-
----CGCAGCTGCG
 A G T C C T G A A C T G A C G T A G T C A C T G A G T C A C T G G T C A A G T C A G C T A C T G A T G C A C G T
A C G T A C G T A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G

NRF1/MA0506.1/Jaspar

Match Rank:4
Score:0.53
Offset:5
Orientation:forward strand
Alignment:CAGTCGCGACTGC---
-----GCGCCTGCGCA
 A G T C C T G A A C T G A C G T A G T C A C T G A G T C A C T G G T C A A G T C A G C T A C T G A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A

PB0050.1_Osr1_1/Jaspar

Match Rank:5
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----CAGTCGCGACTGC
ATTTACAGTAGCAAAA--
 A C G T A C G T A C G T A C G T A C G T A G T C C T G A A C T G A C G T A G T C A C T G A G T C A C T G G T C A A G T C A G C T A C T G A T G C
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A A C G T A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:6
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----CAGTCGCGACTGC
ATGTACAGTAGCAAAG--
 A C G T A C G T A C G T A C G T A C G T A G T C C T G A A C T G A C G T A G T C A C T G A G T C A C T G G T C A A G T C A G C T A C T G A T G C
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:7
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:CAGTCGCGACTGC----
NNNNAGCAGCTGCTGAN
 A G T C C T G A A C T G A C G T A G T C A C T G A G T C A C T G G T C A A G T C A G C T A C T G A T G C A C G T A C G T A C G T A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.50
Offset:3
Orientation:forward strand
Alignment:CAGTCGCGACTGC
---VBSYGTCTGG
 A G T C C T G A A C T G A C G T A G T C A C T G A G T C A C T G G T C A A G T C A G C T A C T G A T G C
A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:9
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--CAGTCGCGACTGC
GTCATGCHTGRCTGS
 A C G T A C G T A G T C C T G A A C T G A C G T A G T C A C T G A G T C A C T G G T C A A G T C A G C T A C T G A T G C
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:CAGTCGCGACTGC----
-----GCGCATGCGCAG
 A G T C C T G A A C T G A C G T A G T C A C T G A G T C A C T G G T C A A G T C A G C T A C T G A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G