Information for 6-AAGGCCGTGT (Motif 20)

T C G A T G C A T C A G C T A G A G T C A G T C A C T G C G A T A T C G A C G T
Reverse Opposite:
T G C A T A G C G C T A T G A C T A C G T C A G G A T C A G T C A C G T A G C T
p-value:1e-6
log p-value:-1.558e+01
Information Content per bp:1.661
Number of Target Sequences with motif96.0
Percentage of Target Sequences with motif10.21%
Number of Background Sequences with motif2763.1
Percentage of Background Sequences with motif5.88%
Average Position of motif in Targets52.7 +/- 26.6bp
Average Position of motif in Background50.4 +/- 32.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:AAGGCCGTGT
-AGGCCTNG-
 T C G A T G C A T C A G C T A G A G T C A G T C A C T G C G A T A T C G A C G T
A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AAGGCCGTGT
-AGGCCTAG-
 T C G A T G C A T C A G C T A G A G T C A G T C A C T G C G A T A T C G A C G T
A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AAGGCCGTGT----
CAGGCCNNGGCCNN
 T C G A T G C A T C A G C T A G A G T C A G T C A C T G C G A T A T C G A C G T A C G T A C G T A C G T A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

Klf12/MA0742.1/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---AAGGCCGTGT--
NANAAGGGCGTGGTC
 A C G T A C G T A C G T T C G A T G C A T C A G C T A G A G T C A G T C A C T G C G A T A T C G A C G T A C G T A C G T
C G T A C G T A C G A T C G T A C G T A C T A G T C A G C T A G G A T C C A T G A C G T A T C G C A T G A G C T G T A C

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AAGGCCGTGT
CAAGGHCANV-
 A C G T T C G A T G C A T C A G C T A G A G T C A G T C A C T G C G A T A T C G A C G T
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T

KLF13/MA0657.1/Jaspar

Match Rank:6
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----AAGGCCGTGT---
CAAAAAGGGGCGTGGCAT
 A C G T A C G T A C G T A C G T A C G T T C G A T G C A T C A G C T A G A G T C A G T C A C T G C G A T A T C G A C G T A C G T A C G T A C G T
G T A C G T C A G T C A G T C A C T G A C T G A C A T G C T A G A C T G C T A G G A T C T A C G A G C T C A T G C A T G G A T C G T C A G A C T

KLF14/MA0740.1/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AAGGCCGTGT--
AAGGGGGCGTGGCC
 A C G T A C G T T C G A T G C A T C A G C T A G A G T C A G T C A C T G C G A T A T C G A C G T A C G T A C G T
C T G A C T G A C T A G C A T G T C A G T C A G A T C G A G T C C A T G A C G T T C A G C A T G A G T C G T A C

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AAGGCCGTGT
GAGSCCGAGC
 T C G A T G C A T C A G C T A G A G T C A G T C A C T G C G A T A T C G A C G T
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AAGGCCGTGT
NTCAAGGTCA---
 A C G T A C G T A C G T T C G A T G C A T C A G C T A G A G T C A G T C A C T G C G A T A T C G A C G T
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T

SP8/MA0747.1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AAGGCCGTGT-
AGTGGGCGTGGC
 A C G T T C G A T G C A T C A G C T A G A G T C A G T C A C T G C G A T A T C G A C G T A C G T
C T G A T C A G A C G T T C A G A T C G A T C G T G A C C A T G C A G T C A T G C A T G A G T C