Information for 2-CTGTGCCGGGGCC (Motif 2)

A T G C G A C T A C T G A C G T A T C G A T G C A T G C T A C G A C T G C A T G A C T G T A G C T G A C
Reverse Opposite:
A C T G A T C G T G A C G T A C G T A C A T G C T A C G A T C G A T G C G T C A T G A C C T G A A T C G
p-value:1e-11
log p-value:-2.751e+01
Information Content per bp:1.736
Number of Target Sequences with motif45.0
Percentage of Target Sequences with motif4.79%
Number of Background Sequences with motif639.0
Percentage of Background Sequences with motif1.36%
Average Position of motif in Targets56.3 +/- 25.9bp
Average Position of motif in Background49.7 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CTGTGCCGGGGCC
-GGGGGCGGGGCC
 A T G C G A C T A C T G A C G T A T C G A T G C A T G C T A C G A C T G C A T G A C T G T A G C T G A C
A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C

Zfx/MA0146.2/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CTGTGCCGGGGCC--
-GGGGCCGAGGCCTG
 A T G C G A C T A C T G A C G T A T C G A T G C A T G C T A C G A C T G C A T G A C T G T A G C T G A C A C G T A C G T
A C G T A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CTGTGCCGGGGCC
CTGTTCCTGG---
 A T G C G A C T A C T G A C G T A T C G A T G C A T G C T A C G A C T G C A T G A C T G T A G C T G A C
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTGTGCCGGGGCC
CTGCGCATGCGC-
 A T G C G A C T A C T G A C G T A T C G A T G C A T G C T A C G A C T G C A T G A C T G T A G C T G A C
A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:5
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CTGTGCCGGGGCC-----
---TGCCTGCGYCMCCTT
 A T G C G A C T A C T G A C G T A T C G A T G C A T G C T A C G A C T G C A T G A C T G T A G C T G A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CTGTGCCGGGGCC---
--ATGCCCGGGCATGT
 A T G C G A C T A C T G A C G T A T C G A T G C A T G C T A C G A C T G C A T G A C T G T A G C T G A C A C G T A C G T A C G T
A C G T A C G T G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T

PB0010.1_Egr1_1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTGTGCCGGGGCC--
-ANTGCGGGGGCGGN
 A T G C G A C T A C T G A C G T A T C G A T G C A T G C T A C G A C T G C A T G A C T G T A G C T G A C A C G T A C G T
A C G T G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A

EGR3/MA0732.1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTGTGCCGGGGCC---
-ANTGCGTGGGCGTNN
 A T G C G A C T A C T G A C G T A T C G A T G C A T G C T A C G A C T G C A T G A C T G T A G C T G A C A C G T A C G T A C G T
A C G T C G T A C T A G G A C T C T A G A G T C T A C G A C G T T C A G C T A G A T C G G A T C C T A G C A G T C T G A C T A G

NRF1/MA0506.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTGTGCCGGGGCC
-TGCGCAGGCGC-
 A T G C G A C T A C T G A C G T A T C G A T G C A T G C T A C G A C T G C A T G A C T G T A G C T G A C
A C G T A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CTGTGCCGGGGCC--
NAGANTGGCGGGGNGNA
 A C G T A C G T A T G C G A C T A C T G A C G T A T C G A T G C A T G C T A C G A C T G C A T G A C T G T A G C T G A C A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A