Information for 6-GCACCMGGGMCMGCRG (Motif 11)

A C T G A G T C C G T A A G T C A G T C G T A C A C T G A C T G A C T G G T A C A G T C G T C A A C T G A G T C C T G A A T C G
Reverse Opposite:
A T G C A G C T A C T G A G T C A C G T A C T G A C T G A G T C A G T C A G T C A C T G A C T G C T A G C G A T A C T G A G T C
p-value:1e-8
log p-value:-1.941e+01
Information Content per bp:1.893
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif6.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.5 +/- 27.8bp
Average Position of motif in Background50.8 +/- 7.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST/MA0138.2/Jaspar

Match Rank:1
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----GCACCMGGGMCMGCRG-
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C A G T C G T A C A C T G A C T G A C T G G T A C A G T C G T C A A C T G A G T C C T G A A T C G A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:2
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---GCACCMGGGMCMGCRG-
TCAGCACCATGGACAGCTCC
 A C G T A C G T A C G T A C T G A G T C C G T A A G T C A G T C G T A C A C T G A C T G A C T G G T A C A G T C G T C A A C T G A G T C C T G A A T C G A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

PB0200.1_Zfp187_2/Jaspar

Match Rank:3
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----GCACCMGGGMCMGCRG
NNAGGGACAAGGGCNC----
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C A G T C G T A C A C T G A C T G A C T G G T A C A G T C G T C A A C T G A G T C C T G A A T C G
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C A C G T A C G T A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:4
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GCACCMGGGMCMGCRG
CGCACCTGCT-------
 A C G T A C T G A G T C C G T A A G T C A G T C G T A C A C T G A C T G A C T G G T A C A G T C G T C A A C T G A G T C C T G A A T C G
G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:5
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----GCACCMGGGMCMGCRG
NNTNCGCACCTGTNGAN----
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C A G T C G T A C A C T G A C T G A C T G G T A C A G T C G T C A A C T G A G T C C T G A A T C G
G C A T C A G T G C A T A G C T G A T C T C A G G T A C C T G A A T G C T A G C A C G T A C T G A C G T C A T G C A T G G T C A A G C T A C G T A C G T A C G T A C G T

MTF1/MA0863.1/Jaspar

Match Rank:6
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---GCACCMGGGMCMGCRG
TTTGCACACGGCAC-----
 A C G T A C G T A C G T A C T G A G T C C G T A A G T C A G T C G T A C A C T G A C T G A C T G G T A C A G T C G T C A A C T G A G T C C T G A A T C G
C A G T A C G T G A C T T C A G G T A C C G T A T A G C G T C A A G T C C A T G C A T G A G T C T G C A G A T C A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GCACCMGGGMCMGCRG
---CCAGGAACAG---
 A C T G A G T C C G T A A G T C A G T C G T A C A C T G A C T G A C T G G T A C A G T C G T C A A C T G A G T C C T G A A T C G
A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:8
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GCACCMGGGMCMGCRG
AACACCTGCT-------
 A C G T A C T G A G T C C G T A A G T C A G T C G T A C A C T G A C T G A C T G G T A C A G T C G T C A A C T G A G T C C T G A A T C G
G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GCACCMGGGMCMGCRG
NNCACCTGNN-------
 A C G T A C T G A G T C C G T A A G T C A G T C G T A C A C T G A C T G A C T G G T A C A G T C G T C A A C T G A G T C C T G A A T C G
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ID4/MA0824.1/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GCACCMGGGMCMGCRG
TACACCTGTC-------
 A C G T A C T G A G T C C G T A A G T C A G T C G T A C A C T G A C T G A C T G G T A C A G T C G T C A A C T G A G T C C T G A A T C G
C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T