Information for 6-GCTGCCTGTAGAG (Motif 10)

A C T G A G T C A C G T A C T G G T A C A T G C A G C T A C T G A C G T C T G A A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C A G C T G T C A A G T C C T G A A T C G A C T G A G T C T G C A A C T G A G T C
p-value:1e-8
log p-value:-2.023e+01
Information Content per bp:1.864
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.17%
Number of Background Sequences with motif42.8
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets49.2 +/- 27.7bp
Average Position of motif in Background47.3 +/- 24.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:1
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GCTGCCTGTAGAG
--TGCGTG-----
 A C T G A G T C A C G T A C T G G T A C A T G C A G C T A C T G A C G T C T G A A C T G C G T A A C T G
A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GCTGCCTGTAGAG
TGCTGACTCA----
 A C G T A C T G A G T C A C G T A C T G G T A C A T G C A G C T A C T G A C G T C T G A A C T G C G T A A C T G
G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T A C G T A C G T A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----GCTGCCTGTAGAG--
SMCAGTCWGAKGGAGGAGGC
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G G T A C A T G C A G C T A C T G A C G T C T G A A C T G C G T A A C T G A C G T A C G T
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GCTGCCTGTAGAG-
GGCCYCCTGCTGDGH
 A C G T A C T G A G T C A C G T A C T G G T A C A T G C A G C T A C T G A C G T C T G A A C T G C G T A A C T G A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

ZNF354C/MA0130.1/Jaspar

Match Rank:5
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:GCTGCCTGTAGAG
-------GTGGAT
 A C T G A G T C A C G T A C T G G T A C A T G C A G C T A C T G A C G T C T G A A C T G C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T

Mafb/MA0117.2/Jaspar

Match Rank:6
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----GCTGCCTGTAGAG
AAAATGCTGACT------
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G G T A C A T G C A G C T A C T G A C G T C T G A A C T G C G T A A C T G
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:7
Score:0.50
Offset:5
Orientation:forward strand
Alignment:GCTGCCTGTAGAG--
-----BTBRAGTGSN
 A C T G A G T C A C G T A C T G G T A C A T G C A G C T A C T G A C G T C T G A A C T G C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

GLIS1/MA0735.1/Jaspar

Match Rank:8
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:GCTGCCTGTAGAG---
GCTTCGTGGGGGGTCT
 A C T G A G T C A C G T A C T G G T A C A T G C A G C T A C T G A C G T C T G A A C T G C G T A A C T G A C G T A C G T A C G T
T A C G G T A C C G A T G C A T G T A C A C T G G A C T A C T G C T A G A T C G A T C G C A T G A T C G G C A T T G A C C A G T

NRL/MA0842.1/Jaspar

Match Rank:9
Score:0.49
Offset:-5
Orientation:forward strand
Alignment:-----GCTGCCTGTAGAG
AATTTGCTGAC-------
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G G T A C A T G C A G C T A C T G A C G T C T G A A C T G C G T A A C T G
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-GCTGCCTGTAGAG
NGCTN---------
 A C G T A C T G A G T C A C G T A C T G G T A C A T G C A G C T A C T G A C G T C T G A A C T G C G T A A C T G
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T