Information for 10-GGCTRCTWTRRAT (Motif 9)

A C T G C T A G A G T C C G A T C T A G G T A C A C G T C G T A A C G T C T G A C T G A C G T A A C G T
Reverse Opposite:
C G T A A C G T A G C T A G C T C G T A C G A T C G T A A C T G A G T C C G T A A C T G A G T C A G T C
p-value:1e-13
log p-value:-3.106e+01
Information Content per bp:1.870
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.5 +/- 28.5bp
Average Position of motif in Background73.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0051.1_Osr2_1/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GGCTRCTWTRRAT
CNNNGCTACTGTANNN
 A C G T A C G T A C G T A C T G C T A G A G T C C G A T C T A G G T A C A C G T C G T A A C G T C T G A C T G A C G T A A C G T
G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T

PB0050.1_Osr1_1/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GGCTRCTWTRRAT
TNNTGCTACTGTNNNN
 A C G T A C G T A C G T A C T G C T A G A G T C C G A T C T A G G T A C A C G T C G T A A C G T C T G A C T G A C G T A A C G T
G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

MEF2B/MA0660.1/Jaspar

Match Rank:3
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GGCTRCTWTRRAT---
----GCTATAAATAGC
 A C T G C T A G A G T C C G A T C T A G G T A C A C G T C G T A A C G T C T G A C T G A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C

MEF2D/MA0773.1/Jaspar

Match Rank:4
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GGCTRCTWTRRAT---
----ACTATAAATAGA
 A C T G C T A G A G T C C G A T C T A G G T A C A C G T C G T A A C G T C T G A C T G A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A

MEF2A/MA0052.3/Jaspar

Match Rank:5
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GGCTRCTWTRRAT---
----TCTAAAAATAGA
 A C T G C T A G A G T C C G A T C T A G G T A C A C G T C G T A A C G T C T G A C T G A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A

LIN54/MA0619.1/Jaspar

Match Rank:6
Score:0.55
Offset:5
Orientation:forward strand
Alignment:GGCTRCTWTRRAT-
-----ATTTGAATT
 A C T G C T A G A G T C C G A T C T A G G T A C A C G T C G T A A C G T C T G A C T G A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GGCTRCTWTRRAT
NGCTN--------
 A C T G C T A G A G T C C G A T C T A G G T A C A C G T C G T A A C G T C T G A C T G A C G T A A C G T
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GGCTRCTWTRRAT--
-NNTNTCATGAATGT
 A C T G C T A G A G T C C G A T C T A G G T A C A C G T C G T A A C G T C T G A C T G A C G T A A C G T A C G T A C G T
A C G T A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T

Hoxc9/MA0485.1/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GGCTRCTWTRRAT---
---GGCCATAAATCAC
 A C T G C T A G A G T C C G A T C T A G G T A C A C G T C G T A A C G T C T G A C T G A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T A C G G A T C G T A C C T G A A G C T T G C A C G T A G T C A C G A T G A T C G C T A A G T C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GGCTRCTWTRRAT
TWGTCTGV-------
 A C G T A C G T A C T G C T A G A G T C C G A T C T A G G T A C A C G T C G T A A C G T C T G A C T G A C G T A A C G T
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T