Information for 7-GCCAGAAAAGGAA (Motif 7)

C T A G T G A C A T G C C G T A T C A G T C G A C T G A T C G A C T G A C A T G C A T G C T G A C T G A
Reverse Opposite:
A G C T G A C T G T A C G A T C G A C T A G C T A G C T A G C T A G T C C G A T A T C G A C T G G A T C
p-value:1e-14
log p-value:-3.449e+01
Information Content per bp:1.648
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.6 +/- 23.1bp
Average Position of motif in Background57.7 +/- 9.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GCCAGAAAAGGAA
-CCATATATGGNA
 C T A G T G A C A T G C C G T A T C A G T C G A C T G A T C G A C T G A C A T G C A T G C T G A C T G A
A C G T A T G C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G C A T G T G A C G T C A

MF0008.1_MADS_class/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GCCAGAAAAGGAA
-CCATATATGG--
 C T A G T G A C A T G C C G T A T C A G T C G A C T G A T C G A C T G A C A T G C A T G C T G A C T G A
A C G T G T A C G A T C C G T A G C A T C G T A G C A T G C T A C G A T T C A G C T A G A C G T A C G T

PB0078.1_Srf_1/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCCAGAAAAGGAA
TTCCATATATGGAA
 A C G T C T A G T G A C A T G C C G T A T C A G T C G A C T G A T C G A C T G A C A T G C A T G C T G A C T G A
G C A T C G A T G T A C A G T C C G T A C G A T C G T A G C A T C G T A G C A T C T A G C A T G G C A T G T C A

CTCF/MA0139.1/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCCAGAAAAGGAA----
TGGCCACCAGGGGGCGCTA
 A C G T A C G T C T A G T G A C A T G C C G T A T C A G T C G A C T G A T C G A C T G A C A T G C A T G C T G A C T G A A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GCCAGAAAAGGAA-------
GCCASCAGGGGGCGCYVNNG
 C T A G T G A C A T G C C G T A T C A G T C G A C T G A T C G A C T G A C A T G C A T G C T G A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

SPIB/MA0081.1/Jaspar

Match Rank:6
Score:0.57
Offset:6
Orientation:forward strand
Alignment:GCCAGAAAAGGAA
------AGAGGAA
 C T A G T G A C A T G C C G T A T C A G T C G A C T G A T C G A C T G A C A T G C A T G C T G A C T G A
A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GCCAGAAAAGGAA
CGTGCCAAG-------
 A C G T A C G T A C G T C T A G T G A C A T G C C G T A T C A G T C G A C T G A T C G A C T G A C A T G C A T G C T G A C T G A
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCCAGAAAAGGAA
TGCCAA--------
 A C G T C T A G T G A C A T G C C G T A T C A G T C G A C T G A T C G A C T G A C A T G C A T G C T G A C T G A
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GCCAGAAAAGGAA--
-----AACAGGAAGT
 C T A G T G A C A T G C C G T A T C A G T C G A C T G A T C G A C T G A C A T G C A T G C T G A C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:10
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GCCAGAAAAGGAA---
----AAAGRGGAAGTG
 C T A G T G A C A T G C C G T A T C A G T C G A C T G A T C G A C T G A C A T G C A T G C T G A C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C T G A C G T A C T A G T C G A C T A G A C T G C G T A C G T A T A C G A G C T A T C G