Information for 16-RAWTWACGAC (Motif 22)

T C G A C G T A C G A T A C G T C G T A C T G A A T G C T A C G T G C A A G T C
Reverse Opposite:
C T A G A C G T A T G C T A C G A G C T G C A T T G C A G C A T C G A T A G C T
p-value:1e-5
log p-value:-1.264e+01
Information Content per bp:1.652
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.00%
Number of Background Sequences with motif229.8
Percentage of Background Sequences with motif0.49%
Average Position of motif in Targets49.2 +/- 29.5bp
Average Position of motif in Background50.9 +/- 24.8bp
Strand Bias (log2 ratio + to - strand density)-1.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXC10/MA0905.1/Jaspar

Match Rank:1
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:RAWTWACGAC
NTTTTACGAC
 T C G A C G T A C G A T A C G T C G T A C T G A A T G C T A C G T G C A A G T C
C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C

HOXC11/MA0651.1/Jaspar

Match Rank:2
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:RAWTWACGAC-
NTTTTACGACC
 T C G A C G T A C G A T A C G T C G T A C T G A A T G C T A C G T G C A A G T C A C G T
C G T A C G A T C A G T C G A T G C A T C G T A A G T C C T A G C T G A A G T C G A T C

HOXD11/MA0908.1/Jaspar

Match Rank:3
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:RAWTWACGAC
NTTTTACGAC
 T C G A C G T A C G A T A C G T C G T A C T G A A T G C T A C G T G C A A G T C
C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C

Hoxa11/MA0911.1/Jaspar

Match Rank:4
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-RAWTWACGAC-
ANTTTTACGACC
 A C G T T C G A C G T A C G A T A C G T C G T A C T G A A T G C T A C G T G C A A G T C A C G T
G C T A C G T A C G A T C G A T G C A T G C A T G C T A G A T C C T A G T C G A A G T C G A T C

PH0077.1_Hoxd12/Jaspar

Match Rank:5
Score:0.79
Offset:-3
Orientation:reverse strand
Alignment:---RAWTWACGAC----
NNNATTTTACGACNNTN
 A C G T A C G T A C G T T C G A C G T A C G A T A C G T C G T A C T G A A T G C T A C G T G C A A G T C A C G T A C G T A C G T A C G T
G T C A C G T A C T A G C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T A G

PH0065.1_Hoxc10/Jaspar

Match Rank:6
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--RAWTWACGAC----
ANNTTTTACGACNTNN
 A C G T A C G T T C G A C G T A C G A T A C G T C G T A C T G A A T G C T A C G T G C A A G T C A C G T A C G T A C G T A C G T
T G C A T A G C C T A G G C A T C A G T C G A T C G A T C G T A A G T C A C T G C T G A A G T C G A C T G C A T G C A T C G T A

PH0047.1_Hoxa11/Jaspar

Match Rank:7
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--RAWTWACGAC----
NNGTTTTACGACTTTA
 A C G T A C G T T C G A C G T A C G A T A C G T C G T A C T G A A T G C T A C G T G C A A G T C A C G T A C G T A C G T A C G T
G T C A G A C T C T A G C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C G T A

PH0076.1_Hoxd11/Jaspar

Match Rank:8
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---RAWTWACGAC----
ANNATTTTACGACNTNA
 A C G T A C G T A C G T T C G A C G T A C G A T A C G T C G T A C T G A A T G C T A C G T G C A A G T C A C G T A C G T A C G T A C G T
G T C A C T A G C T A G C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T G A

PH0067.1_Hoxc12/Jaspar

Match Rank:9
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---RAWTWACGAC----
GNNNTTTTACGACCTNA
 A C G T A C G T A C G T T C G A C G T A C G A T A C G T C G T A C T G A A T G C T A C G T G C A A G T C A C G T A C G T A C G T A C G T
C T A G G C T A T C G A C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C A G C T C G T A C T G A

PH0066.1_Hoxc11/Jaspar

Match Rank:10
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--RAWTWACGAC----
NNNTTTTACGACNTTN
 A C G T A C G T T C G A C G T A C G A T A C G T C G T A C T G A A T G C T A C G T G C A A G T C A C G T A C G T A C G T A C G T
G T A C G A C T C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C T G A