Information for 10-TCTGCAGATGCAGCTT (Motif 20)

A G C T A G T C A C G T A C T G A G T C C G T A C T A G C G T A A C G T A C T G A G T C G T C A A C T G A G T C G A C T A C G T
Reverse Opposite:
G T C A C G T A A C T G A G T C A C G T A C T G A G T C C G T A A C G T A G T C A C G T A C T G A G T C C G T A A C T G C T G A
p-value:1e-8
log p-value:-1.949e+01
Information Content per bp:1.887
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.5 +/- 30.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0003.1_Ascl2_1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TCTGCAGATGCAGCTT
CTCAGCAGCTGCTACTG
 A C G T A G C T A G T C A C G T A C T G A G T C C G T A C T A G C G T A A C G T A C T G A G T C G T C A A C T G A G T C G A C T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TCTGCAGATGCAGCTT
-SDGCAGGTGCNS---
 A G C T A G T C A C G T A C T G A G T C C G T A C T A G C G T A A C G T A C T G A G T C G T C A A C T G A G T C G A C T A C G T
A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TCTGCAGATGCAGCTT
ATATGCAAATNNN----
 A C G T A G C T A G T C A C G T A C T G A G T C C G T A C T A G C G T A A C G T A C T G A G T C G T C A A C T G A G T C G A C T A C G T
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A A C G T A C G T A C G T A C G T

MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer

Match Rank:4
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TCTGCAGATGCAGCTT-
RAAWNTGCTGASTCAGCANW
 A C G T A C G T A C G T A G C T A G T C A C G T A C T G A G T C C G T A C T A G C G T A A C G T A C T G A G T C G T C A A C T G A G T C G A C T A C G T A C G T
C T G A C G T A C G T A C G T A G A T C C G A T T A C G G T A C G C A T C A T G C G T A A T G C G C A T G T A C C G T A C A T G A T G C G C T A C T G A G C A T

MAFG/MA0659.1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TCTGCAGATGCAGCTT---
AAATTGCTGAGTCAGCATATT
 A C G T A C G T A G C T A G T C A C G T A C T G A G T C C G T A C T A G C G T A A C G T A C T G A G T C G T C A A C T G A G T C G A C T A C G T A C G T A C G T A C G T
C G T A C G T A G C T A C G A T G A C T T A C G G T A C G A C T C A T G G C T A A T C G C A G T G T A C C T G A C A T G A T G C C T G A G C A T C G T A G C A T G C A T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TCTGCAGATGCAGCTT
ATATGCAAAT-------
 A C G T A G C T A G T C A C G T A C T G A G T C C G T A C T A G C G T A A C G T A C T G A G T C G T C A A C T G A G T C G A C T A C G T
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TCTGCAGATGCAGCTT
TTATGCAAAT-------
 A C G T A G C T A G T C A C G T A C T G A G T C C G T A C T A G C G T A A C G T A C T G A G T C G T C A A C T G A G T C G A C T A C G T
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TCTGCAGATGCAGCTT
ATCCACAGGTGCGAAAA
 A C G T A G C T A G T C A C G T A C T G A G T C C G T A C T A G C G T A A C G T A C T G A G T C G T C A A C T G A G T C G A C T A C G T
T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TCTGCAGATGCAGCTT
--TGCTGASTCAGC--
 A G C T A G T C A C G T A C T G A G T C C G T A C T A G C G T A A C G T A C T G A G T C G T C A A C T G A G T C G A C T A C G T
A C G T A C G T A C G T A T C G T G A C G C A T C A T G C G T A T A G C G A C T G A T C C T G A A T C G A G T C A C G T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TCTGCAGATGCAGCTT
TTGTATGCAAATTAGA---
 A C G T A C G T A C G T A G C T A G T C A C G T A C T G A G T C C G T A C T A G C G T A A C G T A C T G A G T C G T C A A C T G A G T C G A C T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A A C G T A C G T A C G T