Information for 11-GCAATCAGCA (Motif 16)

A T C G A G T C C G T A C G T A C G A T A G T C C G T A T C A G A G T C T C G A
Reverse Opposite:
A G C T A C T G A G T C C G A T A C T G C G T A C G A T C G A T C T A G A T G C
p-value:1e-11
log p-value:-2.576e+01
Information Content per bp:1.840
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.12%
Number of Background Sequences with motif103.2
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets51.0 +/- 27.8bp
Average Position of motif in Background50.2 +/- 33.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Dux/MA0611.1/Jaspar

Match Rank:1
Score:0.79
Offset:0
Orientation:forward strand
Alignment:GCAATCAGCA
CCAATCAA--
 A T C G A G T C C G T A C G T A C G A T A G T C C G T A T C A G A G T C T C G A
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T

NFYA/MA0060.2/Jaspar

Match Rank:2
Score:0.74
Offset:-4
Orientation:reverse strand
Alignment:----GCAATCAGCA----
TGGACCAATCAGCACTCT
 A C G T A C G T A C G T A C G T A T C G A G T C C G T A C G T A C G A T A G T C C G T A T C A G A G T C T C G A A C G T A C G T A C G T A C G T
A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

NRL/MA0842.1/Jaspar

Match Rank:3
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:GCAATCAGCA----
---GTCAGCANNTN
 A T C G A G T C C G T A C G T A C G A T A G T C C G T A T C A G A G T C T C G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

PH0037.1_Hdx/Jaspar

Match Rank:4
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----GCAATCAGCA--
AAGGCGAAATCATCGCA
 A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G T A C G T A C G A T A G T C C G T A T C A G A G T C T C G A A C G T A C G T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

EN2/MA0642.1/Jaspar

Match Rank:5
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GCAATCAGCA
CCCAATTAGC-
 A C G T A T C G A G T C C G T A C G T A C G A T A G T C C G T A T C A G A G T C T C G A
T A G C A T G C A G T C T G C A T G C A A C G T A G C T C T G A T A C G A T G C A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GCAATCAGCA
GGCCATTAAC-
 A C G T A T C G A G T C C G T A C G T A C G A T A G T C C G T A T C A G A G T C T C G A
C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C A C G T

NFYB/MA0502.1/Jaspar

Match Rank:7
Score:0.68
Offset:-7
Orientation:forward strand
Alignment:-------GCAATCAGCA
AAATGGACCAATCAG--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G T A C G T A C G A T A G T C C G T A T C A G A G T C T C G A
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:8
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GCAATCAGCA----
--NGTCAGCANTTT
 A T C G A G T C C G T A C G T A C G A T A G T C C G T A T C A G A G T C T C G A A C G T A C G T A C G T A C G T
A C G T A C G T G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T

PH0026.1_Duxbl/Jaspar

Match Rank:9
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----GCAATCAGCA---
CGACCCAATCAACGGTG
 A C G T A C G T A C G T A C G T A T C G A G T C C G T A C G T A C G A T A G T C C G T A T C A G A G T C T C G A A C G T A C G T A C G T
A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GCAATCAGCA
TGAGTCAGCA
 A T C G A G T C C G T A C G T A C G A T A G T C C G T A T C A G A G T C T C G A
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A