Information for 12-AGCTGCTTCCWCC (Motif 13)

C T G A C A T G A T G C G C A T T C A G A T G C G C A T A G C T A T G C G T A C G C A T A G T C G A T C
Reverse Opposite:
C T A G A C T G C G T A C A T G A T C G C T G A C G T A A T C G A G T C C G T A A T C G G A T C A G C T
p-value:1e-12
log p-value:-2.872e+01
Information Content per bp:1.683
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif4.11%
Number of Background Sequences with motif402.0
Percentage of Background Sequences with motif0.85%
Average Position of motif in Targets48.6 +/- 24.7bp
Average Position of motif in Background54.1 +/- 33.6bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-AGCTGCTTCCWCC
CAGCTGTTTCCT--
 A C G T C T G A C A T G A T G C G C A T T C A G A T G C G C A T A G C T A T G C G T A C G C A T A G T C G A T C
G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AGCTGCTTCCWCC--
AGATGCTRCTRCCHT
 C T G A C A T G A T G C G C A T T C A G A T G C G C A T A G C T A T G C G T A C G C A T A G T C G A T C A C G T A C G T
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AGCTGCTTCCWCC
AGCAGCTGCTNN----
 A C G T A C G T A C G T C T G A C A T G A T G C G C A T T C A G A T G C G C A T A G C T A T G C G T A C G C A T A G T C G A T C
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.62
Offset:4
Orientation:forward strand
Alignment:AGCTGCTTCCWCC
----GCTTCC---
 C T G A C A T G A T G C G C A T T C A G A T G C G C A T A G C T A T G C G T A C G C A T A G T C G A T C
A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AGCTGCTTCCWCC
AGCAGCTGCT------
 A C G T A C G T A C G T C T G A C A T G A T G C G C A T T C A G A T G C G C A T A G C T A T G C G T A C G C A T A G T C G A T C
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AGCTGCTTCCWCC
NCAGCTGCTG-----
 A C G T A C G T C T G A C A T G A T G C G C A T T C A G A T G C G C A T A G C T A T G C G T A C G C A T A G T C G A T C
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:7
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------AGCTGCTTCCWCC
CTCAGCAGCTGCTACTG--
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A C A T G A T G C G C A T T C A G A T G C G C A T A G C T A T G C G T A C G C A T A G T C G A T C
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGCTGCTTCCWCC
CAGCTGNT------
 A C G T C T G A C A T G A T G C G C A T T C A G A T G C G C A T A G C T A T G C G T A C G C A T A G T C G A T C
G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AGCTGCTTCCWCC
TGCAGCTGTCCCT---
 A C G T A C G T A C G T C T G A C A T G A T G C G C A T T C A G A T G C G C A T A G C T A T G C G T A C G C A T A G T C G A T C
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T A C G T A C G T A C G T

PB0058.1_Sfpi1_1/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AGCTGCTTCCWCC---
--NNACTTCCTCTTNN
 C T G A C A T G A T G C G C A T T C A G A T G C G C A T A G C T A T G C G T A C G C A T A G T C G A T C A C G T A C G T A C G T
A C G T A C G T C A G T G C T A C T G A A T G C C G A T C G A T A G T C A G T C A C G T A G T C G C A T G C A T G C T A T C G A