Information for 7-RACTRAAAGTGGA (Motif 7)

C T A G C G T A A G T C A C G T C T A G C G T A C T G A C G T A C A T G C G A T A C T G A C T G C G T A
Reverse Opposite:
A C G T A G T C G T A C C G T A G A T C A C G T A G C T A C G T A G T C C G T A A C T G A C G T A G T C
p-value:1e-11
log p-value:-2.705e+01
Information Content per bp:1.912
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets61.6 +/- 28.1bp
Average Position of motif in Background40.5 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/MA0508.1/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---RACTRAAAGTGGA
AGAAAGTGAAAGTGA-
 A C G T A C G T A C G T C T A G C G T A A G T C A C G T C T A G C G T A C T G A C G T A C A T G C G A T A C T G A C T G C G T A
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A A C G T

IRF1/MA0050.2/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-RACTRAAAGTGGA-------
AAANNGAAAGTGAAAGTAAAN
 A C G T C T A G C G T A A G T C A C G T C T A G C G T A C T G A C G T A C A T G C G A T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

PH0114.1_Nkx2-5/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:RACTRAAAGTGGA---
AAATTCAAGTGGNTTN
 C T A G C G T A A G T C A C G T C T A G C G T A C T G A C G T A C A T G C G A T A C T G A C T G C G T A A C G T A C G T A C G T
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--RACTRAAAGTGGA
GAAAGTGAAAGT---
 A C G T A C G T C T A G C G T A A G T C A C G T C T A G C G T A C T G A C G T A C A T G C G A T A C T G A C T G C G T A
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--RACTRAAAGTGGA
GAAAGTGAAAGT---
 A C G T A C G T C T A G C G T A A G T C A C G T C T A G C G T A C T G A C G T A C A T G C G A T A C T G A C T G C G T A
T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T A C G T A C G T A C G T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--RACTRAAAGTGGA
GAAASYGAAASY---
 A C G T A C G T C T A G C G T A A G T C A C G T C T A G C G T A C T G A C G T A C A T G C G A T A C T G A C T G C G T A
C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:7
Score:0.62
Offset:8
Orientation:reverse strand
Alignment:RACTRAAAGTGGA-
--------GTGGAT
 C T A G C G T A A G T C A C G T C T A G C G T A C T G A C G T A C A T G C G A T A C T G A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--RACTRAAAGTGGA
GRAASTGAAAST---
 A C G T A C G T C T A G C G T A A G T C A C G T C T A G C G T A C T G A C G T A C A T G C G A T A C T G A C T G C G T A
T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T A C G T A C G T A C G T

PH0115.1_Nkx2-6/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:RACTRAAAGTGGA---
AATNTTAAGTGGNTNN
 C T A G C G T A A G T C A C G T C T A G C G T A C T G A C G T A C A T G C G A T A C T G A C T G C G T A A C G T A C G T A C G T
C T G A C T G A C G A T A C T G G C A T A G C T C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T G C T A

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--RACTRAAAGTGGA
GAAAMTGAAACT---
 A C G T A C G T C T A G C G T A A G T C A C G T C T A G C G T A C T G A C G T A C A T G C G A T A C T G A C T G C G T A
C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T A C G T A C G T A C G T