Information for 5-CCMGAAGGGCTGAGAG (Motif 9)

T A G C A T G C G T A C C T A G T C G A C G T A A C T G C T A G A C T G A G T C C A G T A C T G C T G A A C T G C G T A A C T G
Reverse Opposite:
A G T C C G A T A G T C A G C T A G T C G C T A A C T G A G T C A G T C G T A C A C G T A G C T A G T C C A G T A T C G A T C G
p-value:1e-10
log p-value:-2.312e+01
Information Content per bp:1.817
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif11.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets41.1 +/- 17.7bp
Average Position of motif in Background46.7 +/- 24.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:1
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CCMGAAGGGCTGAGAG
---RGKGGGCGGAGC-
 T A G C A T G C G T A C C T A G T C G A C G T A A C T G C T A G A C T G A G T C C A G T A C T G C T G A A C T G C G T A A C T G
A C G T A C G T A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CCMGAAGGGCTGAGAG
TGCCCTNAGGGCA-----
 A C G T A C G T T A G C A T G C G T A C C T A G T C G A C G T A A C T G C T A G A C T G A G T C C A G T A C T G C T G A A C T G C G T A A C T G
G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CCMGAAGGGCTGAGAG
TGCCCNNAGGGCA-----
 A C G T A C G T T A G C A T G C G T A C C T A G T C G A C G T A A C T G C T A G A C T G A G T C C A G T A C T G C T G A A C T G C G T A A C T G
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T A C G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CCMGAAGGGCTGAGAG
TGCCCTNAGGGCA-----
 A C G T A C G T T A G C A T G C G T A C C T A G T C G A C G T A A C T G C T A G A C T G A G T C C A G T A C T G C T G A A C T G C G T A A C T G
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCMGAAGGGCTGAGAG
TCACCTCTGGGCAG----
 A C G T A C G T T A G C A T G C G T A C C T A G T C G A C G T A A C T G C T A G A C T G A G T C C A G T A C T G C T G A A C T G C G T A A C T G
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G A C G T A C G T A C G T A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CCMGAAGGGCTGAGAG
CCGCCCAAGGGCAG----
 A C G T A C G T T A G C A T G C G T A C C T A G T C G A C G T A A C T G C T A G A C T G A G T C C A G T A C T G C T G A A C T G C G T A A C T G
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G A C G T A C G T A C G T A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CCMGAAGGGCTGAGAG-
--NNVDGGGYGGGGCYN
 T A G C A T G C G T A C C T A G T C G A C G T A A C T G C T A G A C T G A G T C C A G T A C T G C T G A A C T G C G T A A C T G A C G T
A C G T A C G T T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A

PB0107.1_Ascl2_2/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CCMGAAGGGCTGAGAG--
--NATNGGGNGGGGANAN
 T A G C A T G C G T A C C T A G T C G A C G T A A C T G C T A G A C T G A G T C C A G T A C T G C T G A A C T G C G T A A C T G A C G T A C G T
A C G T A C G T C T G A T G C A G A C T T C G A C T A G C T A G T C A G G A T C A C T G C A T G A T C G C A T G G C T A A C G T C T G A T A C G

THAP1/MA0597.1/Jaspar

Match Rank:9
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CCMGAAGGGCTGAGAG
---TNNGGGCAG----
 T A G C A T G C G T A C C T A G T C G A C G T A A C T G C T A G A C T G A G T C C A G T A C T G C T G A A C T G C G T A A C T G
A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:10
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CCMGAAGGGCTGAGAG
----GGGGGCGGGGC-
 T A G C A T G C G T A C C T A G T C G A C G T A A C T G C T A G A C T G A G T C C A G T A C T G C T G A A C T G C G T A A C T G
A C G T A C G T A C G T A C G T T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T