Information for 1-CGAGAGGAAA (Motif 5)

G A T C C T A G T G C A A C T G C G T A A C T G C T A G C T G A T G C A G T C A
Reverse Opposite:
A C G T A C G T A G C T G A T C A G T C G C A T G T A C A C G T A G T C C T A G
p-value:1e-12
log p-value:-2.792e+01
Information Content per bp:1.851
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.71%
Number of Background Sequences with motif66.3
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets56.9 +/- 28.2bp
Average Position of motif in Background57.8 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)2.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPIB/MA0081.1/Jaspar

Match Rank:1
Score:0.74
Offset:2
Orientation:forward strand
Alignment:CGAGAGGAAA
--AGAGGAA-
 G A T C C T A G T G C A A C T G C G T A A C T G C T A G C T G A T G C A G T C A
A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CGAGAGGAAA-
-NACAGGAAAT
 G A T C C T A G T G C A A C T G C G T A A C T G C T A G C T G A T G C A G T C A A C G T
A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

PB0140.1_Irf6_2/Jaspar

Match Rank:3
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----CGAGAGGAAA
NNNACCGAGAGTNNN
 A C G T A C G T A C G T A C G T A C G T G A T C C T A G T G C A A C T G C G T A A C T G C T A G C T G A T G C A G T C A
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CGAGAGGAAA---
-NDCAGGAARTNN
 G A T C C T A G T G C A A C T G C G T A A C T G C T A G C T G A T G C A G T C A A C G T A C G T A C G T
A C G T T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CGAGAGGAAA-
-NACAGGAAAT
 G A T C C T A G T G C A A C T G C G T A A C T G C T A G C T G A T G C A G T C A A C G T
A C G T T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

NFATC3/MA0625.1/Jaspar

Match Rank:6
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CGAGAGGAAA--
--AATGGAAAAT
 G A T C C T A G T G C A A C T G C G T A A C T G C T A G C T G A T G C A G T C A A C G T A C G T
A C G T A C G T C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T

NFATC1/MA0624.1/Jaspar

Match Rank:7
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CGAGAGGAAA--
--NNTGGAAANN
 G A T C C T A G T G C A A C T G C G T A A C T G C T A G C T G A T G C A G T C A A C G T A C G T
A C G T A C G T C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CGAGAGGAAA--
--AATGGAAAAT
 G A T C C T A G T G C A A C T G C G T A A C T G C T A G C T G A T G C A G T C A A C G T A C G T
A C G T A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CGAGAGGAAA--
--AGAGGAAGTG
 G A T C C T A G T G C A A C T G C G T A A C T G C T A G C T G A T G C A G T C A A C G T A C G T
A C G T A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G

NFATC2/MA0152.1/Jaspar

Match Rank:10
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:CGAGAGGAAA-
----TGGAAAA
 G A T C C T A G T G C A A C T G C G T A A C T G C T A G C T G A T G C A G T C A A C G T
A C G T A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A