Information for 2-GCTCCCCAGCCTGCAM (Motif 4)

C T A G A G T C A C G T A T G C A G T C A T G C A G T C C T G A A C T G G A T C A G T C A C G T A T C G A T G C T C G A G T C A
Reverse Opposite:
A C G T A C G T A T C G A T G C T C G A A C T G C T A G A G T C A G C T A C T G A T C G A C T G A T C G C G T A A C T G A G T C
p-value:1e-12
log p-value:-2.845e+01
Information Content per bp:1.805
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets62.0 +/- 22.1bp
Average Position of motif in Background40.9 +/- 24.6bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCTCCCCAGCCTGCAM
GCTCCG----------
 C T A G A G T C A C G T A T G C A G T C A T G C A G T C C T G A A C T G G A T C A G T C A C G T A T C G A T G C T C G A G T C A
A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GCTCCCCAGCCTGCAM
--TCCCCA--------
 C T A G A G T C A C G T A T G C A G T C A T G C A G T C C T G A A C T G G A T C A G T C A C G T A T C G A T G C T C G A G T C A
A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GCTCCCCAGCCTGCAM
--TGCCCAGNHW----
 C T A G A G T C A C G T A T G C A G T C A T G C A G T C C T G A A C T G G A T C A G T C A C G T A T C G A T G C T C G A G T C A
A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:4
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GCTCCCCAGCCTGCAM
GCTCCGCCCMCY----
 C T A G A G T C A C G T A T G C A G T C A T G C A G T C C T G A A C T G G A T C A G T C A C G T A T C G A T G C T C G A G T C A
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----GCTCCCCAGCCTGCAM
CNGTCCTCCC----------
 A C G T A C G T A C G T A C G T C T A G A G T C A C G T A T G C A G T C A T G C A G T C C T G A A C T G G A T C A G T C A C G T A T C G A T G C T C G A G T C A
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.52
Offset:-6
Orientation:forward strand
Alignment:------GCTCCCCAGCCTGCAM
GAGCCTGGTACTGWGCCTGR--
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G T C A C G T A T G C A G T C A T G C A G T C C T G A A C T G G A T C A G T C A C G T A T C G A T G C T C G A G T C A
T A C G C T G A C A T G G A T C G T A C G C A T T C A G T A C G A G C T G T C A G A T C G C A T T A C G C G T A C T A G G A T C G A T C C G A T A C T G T C A G A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:7
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GCTCCCCAGCCTGCAM
ATTTCCCAGVAKSCY-
 C T A G A G T C A C G T A T G C A G T C A T G C A G T C C T G A A C T G G A T C A G T C A C G T A T C G A T G C T C G A G T C A
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:GCTCCCCAGCCTGCAM
-----CCAGACAG---
 C T A G A G T C A C G T A T G C A G T C A T G C A G T C C T G A A C T G G A T C A G T C A C G T A T C G A T G C T C G A G T C A
A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GCTCCCCAGCCTGCAM
GGGGCCGAGGCCTG---
 A C G T C T A G A G T C A C G T A T G C A G T C A T G C A G T C C T G A A C T G G A T C A G T C A C G T A T C G A T G C T C G A G T C A
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:GCTCCCCAGCCTGCAM
-----BCAGACWA---
 C T A G A G T C A C G T A T G C A G T C A T G C A G T C C T G A A C T G G A T C A G T C A C G T A T C G A T G C T C G A G T C A
A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T