Information for 6-ATGATGAGTAAAACAA (Motif 9)

G C T A A C G T A C T G C G T A C A G T A T C G C G T A A T C G A G C T C T G A G C T A C G T A C G T A T A G C C T G A C T G A
Reverse Opposite:
A G C T A G C T A T C G A C G T C G A T C A G T G A C T T C G A T A G C G C A T T A G C G C T A C G A T A G T C G T C A C G A T
p-value:1e-10
log p-value:-2.396e+01
Information Content per bp:1.687
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.48%
Number of Background Sequences with motif17.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets61.5 +/- 20.9bp
Average Position of motif in Background40.3 +/- 22.1bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0123.1_Foxl1_2/Jaspar

Match Rank:1
Score:0.62
Offset:4
Orientation:forward strand
Alignment:ATGATGAGTAAAACAA----
----ATATCAAAACAAAACA
 G C T A A C G T A C T G C G T A C A G T A T C G C G T A A T C G A G C T C T G A G C T A C G T A C G T A T A G C C T G A C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

PB0121.1_Foxj3_2/Jaspar

Match Rank:2
Score:0.58
Offset:3
Orientation:forward strand
Alignment:ATGATGAGTAAAACAA----
---AACACCAAAACAAAGGA
 G C T A A C G T A C T G C G T A C A G T A T C G C G T A A T C G A G C T C T G A G C T A C G T A C G T A T A G C C T G A C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

SRY/MA0084.1/Jaspar

Match Rank:3
Score:0.56
Offset:8
Orientation:forward strand
Alignment:ATGATGAGTAAAACAA-
--------GTAAACAAT
 G C T A A C G T A C T G C G T A C A G T A T C G C G T A A T C G A G C T C T G A G C T A C G T A C G T A T A G C C T G A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T

PB0062.1_Sox12_1/Jaspar

Match Rank:4
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:ATGATGAGTAAAACAA---
-----NTTNAGAACAATTA
 G C T A A C G T A C T G C G T A C A G T A T C G C G T A A T C G A G C T C T G A G C T A C G T A C G T A T A G C C T G A C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

PB0108.1_Atf1_2/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--ATGATGAGTAAAACAA
GAATGACGAATAAC----
 A C G T A C G T G C T A A C G T A C T G C G T A C A G T A T C G C G T A A T C G A G C T C T G A G C T A C G T A C G T A T A G C C T G A C T G A
T A C G C T G A T C G A A C G T C T A G C G T A A G T C C T A G G T C A C T G A A G C T C G T A C G T A G T A C A C G T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:6
Score:0.53
Offset:11
Orientation:reverse strand
Alignment:ATGATGAGTAAAACAA-
-----------AACAAT
 G C T A A C G T A C T G C G T A C A G T A T C G C G T A A T C G A G C T C T G A G C T A C G T A C G T A T A G C C T G A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:7
Score:0.53
Offset:1
Orientation:forward strand
Alignment:ATGATGAGTAAAACAA
-TGCTGAGTCA-----
 G C T A A C G T A C T G C G T A C A G T A T C G C G T A A T C G A G C T C T G A G C T A C G T A C G T A T A G C C T G A C T G A
A C G T C G A T T A C G T G A C G A C T C A T G C G T A T A C G A C G T G T A C C T G A A C G T A C G T A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:8
Score:0.53
Offset:10
Orientation:reverse strand
Alignment:ATGATGAGTAAAACAA-
----------NAACAAT
 G C T A A C G T A C T G C G T A C A G T A T C G C G T A A T C G A G C T C T G A G C T A C G T A C G T A T A G C C T G A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:9
Score:0.53
Offset:6
Orientation:forward strand
Alignment:ATGATGAGTAAAACAA-------
------AGAAGAACAAAGGACTA
 G C T A A C G T A C T G C G T A C A G T A T C G C G T A A T C G A G C T C T G A G C T A C G T A C G T A T A G C C T G A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:10
Score:0.53
Offset:9
Orientation:reverse strand
Alignment:ATGATGAGTAAAACAA---
---------RNAACAATGG
 G C T A A C G T A C T G C G T A C A G T A T C G C G T A A T C G A G C T C T G A G C T A C G T A C G T A T A G C C T G A C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G