Information for 6-TGCTAATTTGCAA (Motif 8)

A C G T A C T G A G T C C G A T C G T A C G T A A C G T C G A T C G A T A C T G A G T C C G T A C G T A
Reverse Opposite:
A C G T C G A T T A C G A G T C G C T A G C T A C G T A A C G T A C G T C G T A A C T G A G T C C G T A
p-value:1e-12
log p-value:-2.781e+01
Information Content per bp:1.848
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.66%
Number of Background Sequences with motif17.8
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets48.7 +/- 21.1bp
Average Position of motif in Background54.9 +/- 22.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--TGCTAATTTGCAA
WATGCAAATGAG---
 A C G T A C G T A C G T A C T G A G T C C G A T C G T A C G T A A C G T C G A T C G A T A C T G A G T C C G T A C G T A
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G A C G T A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--TGCTAATTTGCAA
TATGCWAATBAV---
 A C G T A C G T A C G T A C T G A G T C C G A T C G T A C G T A A C G T C G A T C G A T A C T G A G T C C G T A C G T A
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G A C G T A C G T A C G T

PH0155.1_Prrx2/Jaspar

Match Rank:3
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TGCTAATTTGCAA--
AAAGCTAATTAGCGAAA
 A C G T A C G T A C G T A C T G A G T C C G A T C G T A C G T A A C G T C G A T C G A T A C T G A G T C C G T A C G T A A C G T A C G T
C G T A T G C A G T C A T C A G G A T C A G C T C T G A C G T A G A C T A G C T C T G A C T A G A G T C C A T G C T G A C G T A C T G A

POU1F1/MA0784.1/Jaspar

Match Rank:4
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----TGCTAATTTGCAA
AATATGCAAATTAG---
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G A T C G T A C G T A A C G T C G A T C G A T A C T G A G T C C G T A C G T A
C G T A C G T A C G A T C T G A G A C T C A T G A G T C G C T A C G T A G T C A C G A T A C G T C G T A C T A G A C G T A C G T A C G T

POU3F3/MA0788.1/Jaspar

Match Rank:5
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----TGCTAATTTGCAA
ATTATGCTAATTT----
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G A T C G T A C G T A A C G T C G A T C G A T A C T G A G T C C G T A C G T A
C G T A C G A T C G A T C G T A A C G T C A T G A G T C G C A T C G T A C T G A G C A T C G A T C G A T A C G T A C G T A C G T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:6
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----TGCTAATTTGCAA
TTGTATGCAAATTAGA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G A T C G T A C G T A A C G T C G A T C G A T A C T G A G T C C G T A C G T A
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A A C G T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:7
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----TGCTAATTTGCAA
TTGTATGCAAATTAGA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G A T C G T A C G T A A C G T C G A T C G A T A C T G A G T C C G T A C G T A
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A A C G T A C G T

PH0145.1_Pou2f3/Jaspar

Match Rank:8
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----TGCTAATTTGCAA
TTGTATGCAAATTAGA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G A T C G T A C G T A A C G T C G A T C G A T A C T G A G T C C G T A C G T A
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A A C G T A C G T

PH0034.1_Gbx2/Jaspar

Match Rank:9
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TGCTAATTTGCAA--
AGCGCTAATTAGCGATT
 A C G T A C G T A C G T A C T G A G T C C G A T C G T A C G T A A C G T C G A T C G A T A C T G A G T C C G T A C G T A A C G T A C G T
C G T A T A C G T G A C T C A G A T G C A G C T G T C A G C T A C A G T A C G T C T G A T A C G A G T C T A C G C T G A A C G T C A G T

POU3F2/MA0787.1/Jaspar

Match Rank:10
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---TGCTAATTTGCAA
TTATGCAAATTA----
 A C G T A C G T A C G T A C G T A C T G A G T C C G A T C G T A C G T A A C G T C G A T C G A T A C T G A G T C C G T A C G T A
C G A T G C A T T C G A G A C T C A T G A G T C G C T A C G T A G C T A C G A T A C G T G C T A A C G T A C G T A C G T A C G T