Information for 17-GGGTGCTTTGTTCCTA (Motif 25)

A C T G A C T G A C T G A C G T C T A G A G T C A C G T A C G T C G A T A C T G A C G T A G C T A G T C A G T C A G C T G C T A
Reverse Opposite:
C A G T C T G A A C T G A C T G C T G A G T C A A G T C C G T A G T C A C G T A A C T G A G T C C G T A A G T C A G T C A G T C
p-value:1e-5
log p-value:-1.316e+01
Information Content per bp:1.901
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.0 +/- 24.0bp
Average Position of motif in Background32.7 +/- 13.7bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:1
Score:0.66
Offset:4
Orientation:forward strand
Alignment:GGGTGCTTTGTTCCTA
----YCTTTGTTCC--
 A C T G A C T G A C T G A C G T C T A G A G T C A C G T A C G T C G A T A C T G A C G T A G C T A G T C A G T C A G C T G C T A
A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGGTGCTTTGTTCCTA
AGGVNCCTTTGT-----
 A C G T A C T G A C T G A C T G A C G T C T A G A G T C A C G T A C G T C G A T A C T G A C G T A G C T A G T C A G T C A G C T G C T A
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T A C G T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGGTGCTTTGTTCCTA-
TNNTCCTTTGTTCTNNT
 A C T G A C T G A C T G A C G T C T A G A G T C A C G T A C G T C G A T A C T G A C G T A G C T A G T C A G T C A G C T G C T A A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

PB0061.1_Sox11_1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGGTGCTTTGTTCCTA-
NNNTCCTTTGTTCTNNN
 A C T G A C T G A C T G A C G T C T A G A G T C A C G T A C G T C G A T A C T G A C G T A G C T A G T C A G T C A G C T G C T A A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:5
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GGGTGCTTTGTTCCTA
----CCWTTGTYYB--
 A C T G A C T G A C T G A C G T C T A G A G T C A C G T A C G T C G A T A C T G A C G T A G C T A G T C A G T C A G C T G C T A
A C G T A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:6
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GGGTGCTTTGTTCCTA
----CCTTTGTTTT--
 A C T G A C T G A C T G A C G T C T A G A G T C A C G T A C G T C G A T A C T G A C G T A G C T A G T C A G T C A G C T G C T A
A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:7
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GGGTGCTTTGTTCCTA
-----CTTTGT-----
 A C T G A C T G A C T G A C G T C T A G A G T C A C G T A C G T C G A T A C T G A C G T A G C T A G T C A G T C A G C T G C T A
A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GGGTGCTTTGTTCCTA
-TGGACTTTGNNCTCN
 A C T G A C T G A C T G A C G T C T A G A G T C A C G T A C G T C G A T A C T G A C G T A G C T A G T C A G T C A G C T G C T A
A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

Sox6/MA0515.1/Jaspar

Match Rank:9
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GGGTGCTTTGTTCCTA
----CCATTGTTTT--
 A C T G A C T G A C T G A C G T C T A G A G T C A C G T A C G T C G A T A C T G A C G T A G C T A G T C A G T C A G C T G C T A
A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GGGTGCTTTGTTCCTA-
-TGGACTTTGNNCTNTG
 A C T G A C T G A C T G A C G T C T A G A G T C A C G T A C G T C G A T A C T G A C G T A G C T A G T C A G T C A G C T G C T A A C G T
A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G