Information for 10-RAATRTTGTGATG (Motif 18)

T C A G C T G A C G T A A C G T C T A G A C G T A C G T C T A G A C G T A C T G T C G A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T A G T C C G T A A G T C C G T A T G C A A G T C G T C A G A C T A G C T A G T C
p-value:1e-8
log p-value:-1.944e+01
Information Content per bp:1.759
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.85%
Number of Background Sequences with motif61.2
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets48.8 +/- 29.1bp
Average Position of motif in Background53.1 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0121.1_Foxj3_2/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--RAATRTTGTGATG--
NNCTTTGTTTTGNTNNN
 A C G T A C G T T C A G C T G A C G T A A C G T C T A G A C G T A C G T C T A G A C G T A C T G T C G A A C G T A C T G A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:RAATRTTGTGATG--
NNNTGTTGTTGTTNG
 T C A G C T G A C G T A A C G T C T A G A C G T A C G T C T A G A C G T A C T G T C G A A C G T A C T G A C G T A C G T
C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G

PB0120.1_Foxj1_2/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-RAATRTTGTGATG-
GTNTTGTTGTGANNT
 A C G T T C A G C T G A C G T A A C G T C T A G A C G T A C G T C T A G A C G T A C T G T C G A A C G T A C T G A C G T
C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:RAATRTTGTGATG--
---NNHTGTGGTTWN
 T C A G C T G A C G T A A C G T C T A G A C G T A C G T C T A G A C G T A C T G T C G A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.61
Offset:4
Orientation:forward strand
Alignment:RAATRTTGTGATG-
----GCTGTGGTTT
 T C A G C T G A C G T A A C G T C T A G A C G T A C G T C T A G A C G T A C T G T C G A A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:RAATRTTGTGATG
--ATGGGGTGAT-
 T C A G C T G A C G T A A C G T C T A G A C G T A C G T C T A G A C G T A C T G T C G A A C G T A C T G
A C G T A C G T T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:RAATRTTGTGATG
--ATGGGGTGAT-
 T C A G C T G A C G T A A C G T C T A G A C G T A C G T C T A G A C G T A C T G T C G A A C G T A C T G
A C G T A C G T T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:RAATRTTGTGATG--
-----CTGTGGTTTN
 T C A G C T G A C G T A A C G T C T A G A C G T A C G T C T A G A C G T A C T G T C G A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

PB0123.1_Foxl1_2/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:RAATRTTGTGATG----
-NNTTTTGTTTTGATNT
 T C A G C T G A C G T A A C G T C T A G A C G T A C G T C T A G A C G T A C T G T C G A A C G T A C T G A C G T A C G T A C G T A C G T
A C G T C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T

SREBF1/MA0595.1/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:RAATRTTGTGATG
--GTGGGGTGAT-
 T C A G C T G A C G T A A C G T C T A G A C G T A C G T C T A G A C G T A C T G T C G A A C G T A C T G
A C G T A C G T T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T A C G T