Information for 8-AAGRACACMWTTK (Motif 16)

C G T A C G T A A C T G C T G A C G T A G T A C C G T A A G T C G T A C G C A T A C G T A C G T A C G T
Reverse Opposite:
G T C A C G T A C G T A C G T A A C T G A C T G A C G T A C T G A C G T A G C T A G T C A C G T A C G T
p-value:1e-8
log p-value:-2.036e+01
Information Content per bp:1.876
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif9.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets27.5 +/- 16.8bp
Average Position of motif in Background41.4 +/- 31.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR4A2/MA0160.1/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AAGRACACMWTTK
AAGGTCAC-----
 C G T A C G T A A C T G C T G A C G T A G T A C C G T A A G T C G T A C G C A T A C G T A C G T A C G T
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AAGRACACMWTTK
CCAGGAACAG-----
 A C G T A C G T C G T A C G T A A C T G C T G A C G T A G T A C C G T A A G T C G T A C G C A T A C G T A C G T A C G T
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AAGRACACMWTTK-
CATAAGACCACCATTAC
 A C G T A C G T A C G T C G T A C G T A A C T G C T G A C G T A G T A C C G T A A G T C G T A C G C A T A C G T A C G T A C G T A C G T
A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

PB0208.1_Zscan4_2/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AAGRACACMWTTK-
CGAAGCACACAAAATA
 A C G T A C G T C G T A C G T A A C T G C T G A C G T A G T A C C G T A A G T C G T A C G C A T A C G T A C G T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AAGRACACMWTTK--
AAGAACATWHTGTTC
 C G T A C G T A A C T G C T G A C G T A G T A C C G T A A G T C G T A C G C A T A C G T A C G T A C G T A C G T A C G T
C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AAGRACACMWTTK
CAAGGHCANV----
 A C G T C G T A C G T A A C T G C T G A C G T A G T A C C G T A A G T C G T A C G C A T A C G T A C G T A C G T
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AAGRACACMWTTK
TCAAGGTCAN-----
 A C G T A C G T C G T A C G T A A C T G C T G A C G T A G T A C C G T A A G T C G T A C G C A T A C G T A C G T A C G T
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T A C G T A C G T A C G T

PH0164.1_Six4/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AAGRACACMWTTK-
ATAAATGACACCTATCA
 A C G T A C G T A C G T C G T A C G T A A C T G C T G A C G T A G T A C C G T A A G T C G T A C G C A T A C G T A C G T A C G T A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

PB0053.1_Rara_1/Jaspar

Match Rank:9
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----AAGRACACMWTTK
TCTCAAAGGTCACCTG--
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G C T G A C G T A G T A C C G T A A G T C G T A C G C A T A C G T A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G A C G T A C G T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AAGRACACMWTTK--
VAGRACAKWCTGTYC
 C G T A C G T A A C T G C T G A C G T A G T A C C G T A A G T C G T A C G C A T A C G T A C G T A C G T A C G T A C G T
T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C