Information for 10-GTCAAACAGTGGTCTC (Motif 13)

C T A G A C G T A G T C C G T A C T G A G T C A A G T C C G T A A C T G C G A T A C T G A C T G A C G T A G T C A C G T A T G C
Reverse Opposite:
A T C G C G T A A C T G C G T A G T A C G T A C C G T A A G T C A C G T A C T G A C G T A G C T A C G T A C T G C G T A A G T C
p-value:1e-9
log p-value:-2.110e+01
Information Content per bp:1.917
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.0 +/- 19.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0099.1_Zfp691_1/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GTCAAACAGTGGTCTC---
--CGAACAGTGCTCACTAT
 C T A G A C G T A G T C C G T A C T G A G T C A A G T C C G T A A C T G C G A T A C T G A C T G A C G T A G T C A C G T A T G C A C G T A C G T A C G T
A C G T A C G T A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

Rarb(var.2)/MA0858.1/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GTCAAACAGTGGTCTC
AGGTCAACTAAAGGTCA-
 A C G T A C G T C T A G A C G T A G T C C G T A C T G A G T C A A G T C C G T A A C T G C G A T A C T G A C T G A C G T A G T C A C G T A T G C
T C G A A T C G C A T G A G C T A T G C C T G A G T C A T G A C A G C T C G T A C T G A C T G A T A C G A C T G A C G T A G T C C T G A A C G T

RARA(var.2)/MA0730.1/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GTCAAACAGTGGTCTC
AGGTCATGCAAAGGTCA-
 A C G T A C G T C T A G A C G T A G T C C G T A C T G A G T C A A G T C C G T A A C T G C G A T A C T G A C T G A C G T A G T C A C G T A T G C
T C G A A C T G A C T G A C G T G A T C T G C A G A C T A T C G A G T C C G T A T C G A T C G A C A T G A C T G A C G T A T G C C T G A A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GTCAAACAGTGGTCTC---
--NNANTGGTGGTCTTNNN
 C T A G A C G T A G T C C G T A C T G A G T C A A G T C C G T A A C T G C G A T A C T G A C T G A C G T A G T C A C G T A T G C A C G T A C G T A C G T
A C G T A C G T T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GTCAAACAGTGGTCTC
RGGTCADNNAGAGGTCAV
 A C G T A C G T C T A G A C G T A G T C C G T A C T G A G T C A A G T C C G T A A C T G C G A T A C T G A C T G A C G T A G T C A C G T A T G C
C T G A C A T G A C T G A C G T A T G C C G T A C A T G T A C G A T G C G C T A T A C G C T G A C T A G A C T G A C G T A T G C C G T A T A G C

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GTCAAACAGTGGTCTC
--VRAACAATGG----
 C T A G A C G T A G T C C G T A C T G A G T C A A G T C C G T A A C T G C G A T A C T G A C T G A C G T A G T C A C G T A T G C
A C G T A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T A C G T A C G T

RARA::RXRA/MA0159.1/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GTCAAACAGTGGTCTC
AGGTCACGGAGAGGTCA-
 A C G T A C G T C T A G A C G T A G T C C G T A C T G A G T C A A G T C C G T A A C T G C G A T A C T G A C T G A C G T A G T C A C G T A T G C
C T G A A C T G C A T G A C G T A T G C C T G A A G C T T A C G T C A G C T G A T A C G T C G A A C T G A C T G C A G T A T G C C G T A A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:8
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GTCAAACAGTGGTCTC
---RAACAATGGN---
 C T A G A C G T A G T C C G T A C T G A G T C A A G T C C G T A A C T G C G A T A C T G A C T G A C G T A G T C A C G T A T G C
A C G T A C G T A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:9
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---GTCAAACAGTGGTCTC
SCTGTCAVTCAV-------
 A C G T A C G T A C G T C T A G A C G T A G T C C G T A C T G A G T C A A G T C C G T A A C T G C G A T A C T G A C T G A C G T A G T C A C G T A T G C
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZBTB7C/MA0695.1/Jaspar

Match Rank:10
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:GTCAAACAGTGGTCTC
----NTCGGTGGTCGC
 C T A G A C G T A G T C C G T A C T G A G T C A A G T C C G T A A C T G C G A T A C T G A C T G A C G T A G T C A C G T A T G C
A C G T A C G T A C G T A C G T A C G T C A G T A G T C C A T G C A T G C A G T T C A G A C T G C A G T G A T C A T C G G A T C