Information for 15-GCCTTTTGAA (Motif 22)

A C T G T G A C A G T C C G A T C G A T A C G T A C G T T A C G C G T A C T G A
Reverse Opposite:
A G C T G C A T A T G C G T C A C G T A C G T A C G T A A C T G A C T G G T A C
p-value:1e-9
log p-value:-2.167e+01
Information Content per bp:1.839
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif3.12%
Number of Background Sequences with motif338.0
Percentage of Background Sequences with motif0.71%
Average Position of motif in Targets51.2 +/- 28.4bp
Average Position of motif in Background50.8 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.71
Offset:3
Orientation:forward strand
Alignment:GCCTTTTGAA--
---ATTTGAATT
 A C T G T G A C A G T C C G A T C G A T A C G T A C G T T A C G C G T A C T G A A C G T A C G T
A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:GCCTTTTGAA----
----TTTGAAACCG
 A C T G T G A C A G T C C G A T C G A T A C G T A C G T T A C G C G T A C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

TATA-Box(TBP)/Promoter/Homer

Match Rank:3
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GCCTTTTGAA---
-CCTTTTATAGNC
 A C T G T G A C A G T C C G A T C G A T A C G T A C G T T A C G C G T A C T G A A C G T A C G T A C G T
A C G T A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GCCTTTTGAA--
--CCTTTGATGT
 A C T G T G A C A G T C C G A T C G A T A C G T A C G T T A C G C G T A C T G A A C G T A C G T
A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GCCTTTTGAA--
--CCTTTGAWGT
 A C T G T G A C A G T C C G A T C G A T A C G T A C G T T A C G C G T A C T G A A C G T A C G T
A C G T A C G T A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T

HLTF/MA0109.1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCCTTTTGAA
AACCTTATAT-
 A C G T A C T G T G A C A G T C C G A T C G A T A C G T A C G T T A C G C G T A C T G A
C G T A G C T A G T A C A G T C C G A T A C G T C G T A A C G T T C G A G A C T A C G T

Rarg/MA0859.1/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GCCTTTTGAA---
TTGACCTTTTGACCTT
 A C G T A C G T A C G T A C T G T G A C A G T C C G A T C G A T A C G T A C G T T A C G C G T A C T G A A C G T A C G T A C G T
C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:8
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------GCCTTTTGAA
NNATTGGACTTTNGNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G T G A C A G T C C G A T C G A T A C G T A C G T T A C G C G T A C T G A
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

Nr2e1/MA0676.1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GCCTTTTGAA
TTGACTTTT---
 A C G T A C G T A C T G T G A C A G T C C G A T C G A T A C G T A C G T T A C G C G T A C T G A
C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GCCTTTTGAA---
TAAGCCACTTGAATTT
 A C G T A C G T A C G T A C T G T G A C A G T C C G A T C G A T A C G T A C G T T A C G C G T A C T G A A C G T A C G T A C G T
G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T